Sybindin

Sybindin

Sybindin-like family
SMART ACC:SM001399
Description:Sybindin is a physiological syndecan-2 ligand on dendritic spines, the small protrusions on the surface of dendrites that receive the vast majority of excitatory synapses PMID:11018053.
InterPro ACC:IPR007233
InterPro abstract:

This entry includes a group of trafficking protein particle complex subunit (TRAPPC) proteins, such as TPPC1/4 from humans and Trs23/Bet5 from yeasts.

GO process:vesicle-mediated transport (GO:0016192)
GO component:TRAPP complex (GO:0030008)
Family alignment:View the Family alignment or the Alignment consensus sequence
There are 0 Sybindin domains in 0 proteins in SMART's NRDB database.

Relevant references for this domain

Primary literature for the Sybindin domain is listed below.

KEGG pathways involving proteins which contain this domain

This information is based on the mapping of SMART genomic protein database to KEGG orthologous groups. Percentages are related to the number of proteins containing a Sybindin domain which could be assigned to a KEGG orthologous group, and not all proteins containing Sybindin domains. Please note that proteins can be included in multiple pathways, ie. the numbers below will not add to 100%.

KEGG pathways

Some of these pathways are included in the interactive Pathways Explorer overview maps. Select an overview map and click the button below to highlight them in iPath.

KEGG orthologous groups

Some of these KOs are included in the interactive Pathways Explorer overview maps. Select an overview map and click the button below to highlight them in iPath.

3D structures in PDB containing this domain

Links to other resources describing this domain

PfamSybindin
InterProIPR007233