The TSP1 domain within your query sequence starts at position 1496 and ends at position 1551, and its E-value is 1.23e-4.
TSP1Thrombospondin type 1 repeats | |
|---|---|
| SMART ACC: | SM000209 |
| Description: | Type 1 repeats in thrombospondin-1 bind and activate TGF-beta. |
| InterPro ACC: | IPR000884 |
| InterPro abstract: | This repeat was first described in 1986 by Lawler and Hynes [ PUBMED:2430973 ]. It was found in the thrombospondin protein where it is repeated 3 times. Now a number of proteins involved in the complement pathway (properdin, C6, C7, C8A, C8B, C9) [ PUBMED:2459396 … expand |
| Family alignment: | View the Family alignment or the Alignment consensus sequence |
| There are 144 158 TSP1 domains in 35 805 proteins in SMART's NRDB database. | |
Taxonomic distribution of proteins containing TSP1 domains
The tree below includes only several representative species and genera. The complete taxonomic breakdown of all proteins containing TSP1 domains can be accessed here. Click the counts or percentage values to display the corresponding proteins.
Relevant references for this domain
Primary literature for the TSP1 domain is listed below. Automatically-derived, secondary literature is also available.
Disease genes where sequence variants are found in this domain
UniRef sequences and OMIM curated human diseases associated with missense mutations within the TSP1 domain.
| Protein | Description | Disease / phenotype |
|---|---|---|
| PROP_HUMAN | OMIM:312060 : Properdin deficiency, X-linked | |
| CO6_HUMAN | OMIM:217050 : C6 deficiency ; Combined C6/C7 deficiency |
KEGG pathways involving proteins which contain this domain
This information is based on the mapping of SMART genomic protein database to KEGG orthologous groups. Percentages are related to the number of proteins containing a TSP1 domain which could be assigned to a KEGG orthologous group, and not all proteins containing TSP1 domains. Please note that proteins can be included in multiple pathways, ie. the numbers below will not add to 100%.