The domain within your query sequence starts at position 2 and ends at position 76; the E-value for the CDC48_N domain shown below is 6.51e-10.



Cell division protein 48 (CDC48) N-terminal domain
SMART accession number:SM01073
Description: This domain has a double psi-beta barrel fold and includes VCP-like ATPase and N-ethylmaleimide sensitive fusion protein N-terminal domains. Both the VAT and NSF N-terminal functional domains consist of two structural domains of which this is at the N-terminus. The VAT-N domain found in AAA ATPases is a substrate 185-residue recognition domain (PUBMED:10531028).
Interpro abstract (IPR003338):

The CDC48 N-terminal domain is a protein domain found in AAA ATPases including cell division protein 48 (CDC48), VCP-like ATPase (VAT) and N-ethylmaleimide sensitive fusion protein. It is a substrate recognition domain which binds polypeptides, prevents protein aggregation, and catalyses refolding of permissive substrates. It is composed of two equally sized subdomains. The amino-terminal subdomain forms a double-psi beta-barrel whose pseudo-twofold symmetry is mirrored by an internal sequence repeat of 42 residues. The carboxy-terminal subdomain forms a novel six-stranded beta-clam fold [(PUBMED:10531028)]. Together these subdomains form a kidney-shaped structure.

This entry represents the amino-terminal subdomain.
Family alignment:
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There are 6871 CDC48_N domains in 6866 proteins in SMART's nrdb database.

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