The domain within your query sequence starts at position 277 and ends at position 498; the E-value for the ARS2 domain shown below is 6.5e-111.
MPNRCGIIHVRGPMPPNRISHGEVLEWQKTFEEKLTPLLSVRESLSEEEAQKMGRKDPEQ EVEKFVTSNTQELGKDKWLCPLSGKKFKGPEFVRKHIFNKHAEKIEEVKKEVAFFNNFLT DAKRPALPEIKPAQPPGPAQILPPGLTPGLPYPHQTPQGLMPYGQPRPPILGYGAGAVRP AVPTGGPPYPHAPYGAGRGNYDAFRGQGGYPGKPRNRMVRGD
ARS2 |
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PFAM accession number: | PF04959 |
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Interpro abstract (IPR007042): | This domain can be found in the C terminus of the SERRATE (SE) from plants and its homologue, Ars2, from animals. They play a role in nuclear RNA metabolism. They interact with the nuclear cap-binding complex (CBC) and mediates interactions with diverse RNA processing and transport machineries in a transcript-dependent manner. Interestingly, the plant SERRATE does not have the RNA recognition motif (RRM) domain found in metazoans and S. pombe [ (PUBMED:29703953) ]. |
This is a PFAM domain. For full annotation and more information, please see the PFAM entry ARS2