The domain within your query sequence starts at position 29 and ends at position 154; the E-value for the Got1 domain shown below is 5.8e-39.
SWGTRIKGFIACFALGILCSVLGTLLLWVPRKGLGLFAVFYTLGNIMSIGSTVFLMGPLK QLKRMFEPTRLIATILVLLCFALTLCSAFLWNKGLALIFCILQSLALTWYSLSYIPYARD AVKKCF
Got1 |
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PFAM accession number: | PF04178 |
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Interpro abstract (IPR007305): | Traffic through the yeast Golgi complex depends on a member of the syntaxin family of SNARE proteins, Sed5, present in early Golgi cisternae. Got1 is thought to facilitate Sed5-dependent fusion events [ (PUBMED:10406798) ]. This is a family of sequences derived from eukaryotic proteins. They are similar to a region of a SNARE-like protein required for traffic through the Golgi complex, SFT2 protein ( P38166 ) [ (PUBMED:7596416) ]. This is a conserved protein with four putative transmembrane helices, thought to be involved in vesicular transport in later Golgi compartments [ (PUBMED:10406798) ]. |
GO process: | vesicle-mediated transport (GO:0016192) |
This is a PFAM domain. For full annotation and more information, please see the PFAM entry Got1