The domain within your query sequence starts at position 1372 and ends at position 1462; the E-value for the Nup_retrotrp_bd domain shown below is 4.4e-24.
GSGTANASSVFQFGSSTTNFNFTNNNPSGVFTFGASPSTPAASAQPSGSGVFSFSQSPAS FTVGSNGKNMFSSSGTSVSGRKIKTAVRRKK
Nup_retrotrp_bd |
---|
PFAM accession number: | PF10599 |
---|---|
Interpro abstract (IPR018892): | This is the highly conserved motif GRKIxxxxxRRKx of nucleoporins that plays a critical and unique role in the nuclear import of retro-transposons in both yeasts and higher organisms. It would appear that the arginine residues at positions 2 and 9-10 constitute a bipartite nuclear localisation signal, with two basic peptide motifs separated by an interchangeable spacer sequence, that is crucial for the retro-transposon activity [ (PUBMED:17615301) ]. |
This is a PFAM domain. For full annotation and more information, please see the PFAM entry Nup_retrotrp_bd