The domain within your query sequence starts at position 14 and ends at position 627; the E-value for the TLV_coat domain shown below is 1.4e-139.
IWLCLCLMRSISPVVGQVKKNPYRLYNYTWLIINEAGDIANATSKIEGSIPWPILRVDLC KLVLGGHNDWGTHLEFLPQEQAIDDPRQVAYTTPGCASLSRRKTLASVLKRWGIYICPGP SHRSRTLNYKCGFAPDYFCASWGCETTGDTYWKPTSDWDLIKVRSRPDYAACASSNQTSK GWCNTLEISFTDAGRKFNWEYTRGAEWGLRIYKNEKDFGVTFKIQLLKNTPSLGSAAIGP NLFLHSSFPKKPSIPQTVTLGLPGTTIFQPTLPAGSPSSTELILSLVNASIATIHAANAT QYEECWVCFSPQPPFYEGVATFGSVVTINDSSKLGWHPESHDGLTLSQVSGIGLCLLGPS MLPPQALLEVCNQTIIVEATSRYLGAPNGTYLACSTGLTTYIVTQTFLDDRDYCVVVQLL PKLTVHHAEDLLQFWKSDTDLPRNKREPISAVTLAVILGLGVAGTGTGIASLVTSQQQYT QLHLAVDRDIQELQRGLKNLKDSLVSLSEVVLQNRRGLDLVFLKEGGLCAALKEECCFYS DKTGLVQDSIDKVRASLEERKRNREKQESWYKNWFSTSPWVTTLLPTLLGPFLGILLLLS FGPWAFKRLTSFVK
TLV_coat |
---|
PFAM accession number: | PF00429 |
---|---|
Interpro abstract (IPR018154): | Enveloped viruses such as Human immunodeficiency virus 1, influenza virus, and Ebola virus sp. express a surface glycoprotein that mediates both cell attachment and fusion of viral and cellular membranes. The ENV polyprotein (coat polyprotein) usually contains two coat proteins which differ depending on the source. The structure of a number of the ENV polyprotein domains have been determined:
|
This is a PFAM domain. For full annotation and more information, please see the PFAM entry TLV_coat