The domain within your query sequence starts at position 1 and ends at position 820; the E-value for the TRAPPC9-Trs120 domain shown below is 7.6e-224.
MSVPDYMQCAEDHQTLLVVVQAVGIVSEENFFRIYKRICSVSQLSVRDTQRALFIRYRHH YPPENNEWGDFQTHRKVVGLITITDCFSPKDWPQTFEKFHVQKEIYGSTLYDSRLFVFGL QGDVAEQPRPDVAFYPNYDDCDSVEKRIEDFIESLFIVLESKRLDRATDKSGDKIPLLCV PFEKKDFVGLDTDSRHYKKRCQGRMRKHVGDLCLQAGMLQDALVHYHMSVELLRSVNDFL WLGAALEGLCSASVIYHYPGGTGGKTGARRLQGSSLPSEAANRHRPGAQEVLIDPGALTT NGINPDTSTEIGRAKNCLSPEDIIDKYKEAISYYSKYKNAGVIELEACVKAVRVLAIQKR GMEASEFLQNAVYINLRQLSEEEKIQRYSILSELYELIGFHRKSAFFKRVAAMQCVAPSI AEPGWRACYKLLLETLPGYSLSLDPKDFSKGTHRGWAAVQMRLLHELVYASRRMGNPALS VRHLSFLLQTMLDFLSDQEKKDVTQSLENYTAKCPGTMEPITLPDGLTLPPVPFTKLPIV RCVKLLSLPTSLRPHKVKSLLGQSMSTKSPFIYSPIIAHNRGEERNKKIDFQWVQGDVCE VQLMVYNPMPFELRVENMGLLTSGVEFESLPAALSLPAESGLYPVTLVGVPQTTGMITVN GYHTTVFGVFSDCLLDNLPGLKTGGSTVEVIPALPRLQISTSLPRSARSLQPSAGDEIAT NVSVQLYNGETQQLAVTLENIGLEPLEQLEVTSKLLTTKEKLYGDFLSWKLEETLAQFPL QPGKVATFTINIKAKLDFSCQENLLQDLSDDGISVSGFPL
TRAPPC9-Trs120 |
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PFAM accession number: | PF08626 |
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Interpro abstract (IPR013935): | The trafficking protein particle complex TRAPP is a multi-protein complex needed in the early stages of the secretory pathway. To date, two kinds of TRAPP complexes have been studied, TRAPPI and TRAPP II. These complexes differ in subunit composition [ (PUBMED:11239471) ]. TRAPP I binds vesicles derived from the endoplasmic reticulum bringing them closer to the acceptor membrane. Trs120 is a subunit specific to the TRAPP II complex [ (PUBMED:10727015) ] along with Trs65p and Trs130p(TRAPPC10). It is suggested that Trs120p is required for the stability of the Trs130p subunit, suggesting that these two proteins might interact in some way [ (PUBMED:17041589) ]. It is likely that there is a complex function for TRAPP II in multiple pathways [ (PUBMED:18801063) ]. |
This is a PFAM domain. For full annotation and more information, please see the PFAM entry TRAPPC9-Trs120