Domains within Homo sapiens protein SYTC2_HUMAN (A2RTX5)

Probable threonine--tRNA ligase 2, cytoplasmic

Alternative representations: 1 /

Protein length802 aa
Source databaseUniProt
Identifiers SYTC2_HUMAN, A2RTX5, ENSP00000338093.3, ENSP00000338093, B2RMP7, Q6B0A1, Q6IS76, Q96LW3, Q96MP4
Source gene ENSG00000185418
Alternative splicing SYTC2_HUMAN, H0YKB9_HUMAN, B7ZLP8_HUMAN

Domain architecture analysis

Display all proteins with similar:

Domain organisationProteins having all the domains as the query in the same order. Additional domains are allowed.
Domain compositionProteins with the same domain composition have at least one copy of each of the domains of the query.

Predicted functional partners

SYTC2_HUMAN is shown as TARS3 in the network

Click and drag to pan the network, and zoom by using your mouse wheel. Click the protein nodes for additional options.

The network on the left comes from STRING, a database of known and predicted protein interactions. Displayed here is the evidence view, where different line colors represent the types of evidence for the association.

Open the STRING annotation page for TARS3

Protein SYTC2_HUMAN is possibly involved in these pathways, based on its similarity to the listed KEGG orthologous groups:

KEGG pathways

PathwayDescription
map00970Aminoacyl-tRNA biosynthesis

KEGG orthologous groups

KONameDescription
K01868TARS, thrSthreonyl-tRNA synthetase [EC:6.1.1.3]

Post-translational modifications

PTM annotation is taken from PTMcode, a resource of known and predicted functional associations between protein post-translational modifications (PTMs). There are 11 PTMs annotated in this protein:

PTMCount
Phosphorylation5
Ubiquitination3
Methylation2
Acetylation1

To see the full details, including possible functional associations between the PTMs, please visit the PTMcode annotation page for protein TARSL2.

Orthologous groups

Orthology information is taken from eggNOG, a database of orthologous groups of genes. Orthologous groups containing this protein are listed below. This protein is named 9606.ENSP00000338093 in eggNOG.

OGTaxonomic classDescription
LCOG0441All organisms (root)threonyl-tRNA synthetase [EC:6.1.1.3],large subunit ribosomal protein L39,GPI mannosyltransferase 1 subunit X
KOG1637Eukaryota (superkingdom)threonyl-tRNA synthetase [EC:6.1.1.3],large subunit ribosomal protein L39,GPI mannosyltransferase 1 subunit X
HURB7Metazoa (kingdom)threonyl-tRNA synthetase [EC:6.1.1.3],GPI mannosyltransferase 1 subunit X
94C89Chordata (phylum)threonyl-tRNA synthetase [EC:6.1.1.3]
5QSNHSarcopterygii (superclass)threonyl-tRNA synthetase [EC:6.1.1.3]
8Z5AWMammalia (class)threonyl-tRNA synthetase [EC:6.1.1.3]
4RA6GEuarchontoglires (superorder)threonyl-tRNA synthetase [EC:6.1.1.3]
500X1Primates (order)threonyl-tRNA synthetase [EC:6.1.1.3]
98Q46Haplorrhini (suborder)threonyl-tRNA synthetase [EC:6.1.1.3]
BV4YESimiiformes (infraorder)threonyl-tRNA synthetase [EC:6.1.1.3]
9ETV7Catarrhini (parvorder)threonyl-tRNA synthetase [EC:6.1.1.3]
7JWV3Opisthokonta (clade)threonyl-tRNA synthetase [EC:6.1.1.3],GPI mannosyltransferase 1 subunit X,zinc finger HIT domain-containing protein 1
H6ZXKBilateria (clade)threonyl-tRNA synthetase [EC:6.1.1.3],GPI mannosyltransferase 1 subunit X
9GQI6Vertebrata (clade)threonyl-tRNA synthetase [EC:6.1.1.3]
FX14IHominoidea (superfamily)threonyl-tRNA synthetase [EC:6.1.1.3]
5NEHJHominidae (family)threonyl-tRNA synthetase [EC:6.1.1.3]
5XU9WHomininae (subfamily)threonyl-tRNA synthetase [EC:6.1.1.3]

The SMART diagram above represents a summary of the results shown below. Domains with scores less significant than established cutoffs are not shown in the diagram. Features are also not shown when two or more occupy the same piece of sequence; the priority for display is given by SMART > PFAM > PROSPERO repeats > Signal peptide > Transmembrane > Coiled coil > Low complexity. In either case, features not shown in the above diagram are listed in the right side table below, and the reason for their omission is shown in the 'Reason' column.

Confidently predicted domains, repeats, motifs and features:

Outlier homologues and homologues of known structure:

Features NOT shown in the diagram: