Domains within Oryza sativa Indica Group protein CDKD1_ORYSI (A2Y4B6)

Cyclin-dependent kinase D-1

Alternative representations: 1 /

Protein length424 aa
Source databaseUniProt
Identifiers CDKD1_ORYSI, A2Y4B6

Domain architecture analysis

Display all proteins with similar:

Domain organisationProteins having all the domains as the query in the same order. Additional domains are allowed.
Domain compositionProteins with the same domain composition have at least one copy of each of the domains of the query.

This domain architecture was probably invented with the emergence of cellular organisms

Predicted functional partners

CDKD1_ORYSI is shown as CDKD-1 in the network

Click and drag to pan the network, and zoom by using your mouse wheel. Click the protein nodes for additional options.

The network on the left comes from STRING, a database of known and predicted protein interactions. Displayed here is the evidence view, where different line colors represent the types of evidence for the association.

Open the STRING annotation page for CDKD-1

Protein CDKD1_ORYSI is possibly involved in these pathways, based on its similarity to the listed KEGG orthologous groups:

KEGG pathways

PathwayDescription
map03420Nucleotide excision repair

KEGG orthologous groups

KONameDescription
K02202CDK7cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]

Orthologous groups

Orthology information is taken from eggNOG, a database of orthologous groups of genes. Orthologous groups containing this protein are listed below. This protein is named 39946.A2Y4B6 in eggNOG.

OGTaxonomic classDescription
LKOG0659All organisms (root)cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23],cell cycle related kinase [EC:2.7.11.22],F-box and WD-40 domain protein 12/13/14/15/16/17/19
KOG0659Eukaryota (superkingdom)cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23],cell cycle related kinase [EC:2.7.11.22],F-box and WD-40 domain protein 12/13/14/15/16/17/19
G17KMViridiplantae (kingdom)cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
GF4EGStreptophyta (phylum)cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
C7KN4Streptophytina (subphylum)cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
DHH2TMagnoliopsida (class)cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
96BM8Petrosaviidae (subclass)cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
EP3JRPoales (order)cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
51K0ZLiliopsida (clade)cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
FW8NUPoaceae (family)cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
A32V9Oryzinae (subtribe)cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E2J3NOryza (genus)cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
8M13QOryza sativa (species)cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]

The SMART diagram above represents a summary of the results shown below. Domains with scores less significant than established cutoffs are not shown in the diagram. Features are also not shown when two or more occupy the same piece of sequence; the priority for display is given by SMART > PFAM > PROSPERO repeats > Signal peptide > Transmembrane > Coiled coil > Low complexity. In either case, features not shown in the above diagram are listed in the right side table below, and the reason for their omission is shown in the 'Reason' column.

Confidently predicted domains, repeats, motifs and features:

Outlier homologues and homologues of known structure:

Features NOT shown in the diagram: