Domains within Pseudomonas putida W619 protein B1JBJ6_PSEPW (B1JBJ6)
DNA topoisomerase III
Alternative representations: 1 /
| Protein length | 654 aa |
|---|---|
| Source database | UniProt |
| Identifiers | B1JBJ6_PSEPW, B1JBJ6 |
Domain architecture analysis
Display all proteins with similar:
| Domain organisation | Proteins having all the domains as the query in the same order. Additional domains are allowed. |
|---|---|
| Domain composition | Proteins with the same domain composition have at least one copy of each of the domains of the query. |
This domain architecture was probably invented with the emergence of cellular organisms
Predicted functional partners
B1JBJ6_PSEPW is shown as 
ACA73907.1 in the network
Click and drag to pan the network, and zoom by using your mouse wheel. Click the protein nodes for additional options.
The network on the left comes from STRING, a database of known and predicted protein interactions. Displayed here is the evidence view, where different line colors represent the types of evidence for the association.
Protein B1JBJ6_PSEPW is possibly involved in these pathways, based on its similarity to the listed KEGG orthologous groups:
Orthologous groups
Orthology information is taken from eggNOG, a database of orthologous groups of genes. Orthologous groups containing this protein are listed below. This protein is named 390235.PputW619_3423 in eggNOG.
| OG | Taxonomic class | Description |
|---|---|---|
| 8ECQW | Pseudomonas putida group (species group) | DNA topoisomerase III [EC:5.6.2.1] |
| LCOG0550 | All organisms (root) | DNA topoisomerase I [EC:5.6.2.1],DNA topoisomerase III [EC:5.6.2.1],putative DNA topoisomerase |
| COG0550 | Bacteria (superkingdom) | DNA topoisomerase I [EC:5.6.2.1],DNA topoisomerase III [EC:5.6.2.1],ATP-dependent DNA helicase RecQ [EC:5.6.2.4] |
| 5ZTTY | Proteobacteria (phylum) | DNA topoisomerase III [EC:5.6.2.1],DNA topoisomerase I [EC:5.6.2.1],ATP-dependent DNA helicase RecQ [EC:5.6.2.4] |
| ESVW0 | Gammaproteobacteria (class) | DNA topoisomerase III [EC:5.6.2.1] |
| FEMRC | Pseudomonadales (order) | DNA topoisomerase III [EC:5.6.2.1] |
| H9Y9N | Pseudomonadaceae (family) | DNA topoisomerase III [EC:5.6.2.1] |
| 5C9XX | Pseudomonas (genus) | DNA topoisomerase III [EC:5.6.2.1] |
| BAQ10 | Pseudomonas putida (species) | DNA topoisomerase III [EC:5.6.2.1] |
The SMART diagram above represents a summary of the results shown below. Domains with scores less significant than established cutoffs are not shown in the diagram. Features are also not shown when two or more occupy the same piece of sequence; the priority for display is given by SMART > PFAM > PROSPERO repeats > Signal peptide > Transmembrane > Coiled coil > Low complexity. In either case, features not shown in the above diagram are listed in the right side table below, and the reason for their omission is shown in the 'Reason' column.