Domains within Homo sapiens protein PRPF3_HUMAN (O43395)

U4/U6 small nuclear ribonucleoprotein Prp3

Alternative representations: 1 /

Protein length683 aa
Source databaseUniProt
Identifiers PRPF3_HUMAN, O43395, ENSP00000315379.6, ENSP00000315379, B4DSY9, O43446, Q5VT54, G1RFJ5_NOMLE, G1RFJ5, I3LJQ7_PIG, I3LJQ7, K9KCQ3_HORSE, K9KCQ3, E7BS31_TRAEU, E7BS31, E7BS36_EPTFU, E7BS36, U6D4K0_NEOVI, U6D4K0, K9KAQ2_HORSE, K9KAQ2, U3DW67_CALJA, U3DW67, H9G1P1_MACMU, H9G1P1, G2HGL9_PANTR, G2HGL9, E2R4I0_CANLF, E2R4I0, F2Z4C4_BOVIN, F2Z4C4, W5QI06_SHEEP, W5QI06, A0A2K5WYM8_MACFA, A0A2K5WYM8, A0A2J8VEQ4_PONAB, A0A2J8VEQ4, G1T1X4_RABIT, G1T1X4, A0A2K6D112_MACNE, A0A2K6D112, M3WJS5_FELCA, M3WJS5, A0A2K6NT02_RHIRO, A0A2K6NT02, A0A2K5D6K4_AOTNA, A0A2K5D6K4, A0A2K5QN02_CEBCA, A0A2K5QN02, A0A287AP63_PIG, A0A287AP63, L8IN18_9CETA, L8IN18, F7DLG7_HORSE, F7DLG7, I3LZD9_ICTTR, I3LZD9, G3H2W0_CRIGR, G3H2W0
Source gene ENSG00000117360

Domain architecture analysis

Display all proteins with similar:

Domain organisationProteins having all the domains as the query in the same order. Additional domains are allowed.
Domain compositionProteins with the same domain composition have at least one copy of each of the domains of the query.

This domain architecture was probably invented with the emergence of Eukaryota

Predicted functional partners

PRPF3_HUMAN is shown as PRPF3 in the network

Click and drag to pan the network, and zoom by using your mouse wheel. Click the protein nodes for additional options.

The network on the left comes from STRING, a database of known and predicted protein interactions. Displayed here is the evidence view, where different line colors represent the types of evidence for the association.

Open the STRING annotation page for PRPF3

Protein PRPF3_HUMAN is possibly involved in these pathways, based on its similarity to the listed KEGG orthologous groups:

KEGG pathways

PathwayDescription
map03040Spliceosome

KEGG orthologous groups

KONameDescription
K12843PRPF3, PRP3U4/U6 small nuclear ribonucleoprotein PRP3

Post-translational modifications

PTM annotation is taken from PTMcode, a resource of known and predicted functional associations between protein post-translational modifications (PTMs). There are 88 PTMs annotated in this protein:

PTMCount
Phosphorylation80
Nitrosylation4
Ubiquitination4

To see the full details, including possible functional associations between the PTMs, please visit the PTMcode annotation page for protein ENSPTRG00000001254.

Orthologous groups

Orthology information is taken from eggNOG, a database of orthologous groups of genes. Orthologous groups containing this protein are listed below. This protein is named 9606.ENSP00000315379 in eggNOG.

OGTaxonomic classDescription
LKOG2769All organisms (root)U4/U6 small nuclear ribonucleoprotein PRP3,F-type H+-transporting ATPase subunit k,peroxidase [EC:1.11.1.7]
KOG2769Eukaryota (superkingdom)U4/U6 small nuclear ribonucleoprotein PRP3,F-type H+-transporting ATPase subunit k,peroxidase [EC:1.11.1.7]
HT8K9Metazoa (kingdom)U4/U6 small nuclear ribonucleoprotein PRP3,peroxidase [EC:1.11.1.7]
946XFChordata (phylum)U4/U6 small nuclear ribonucleoprotein PRP3
5QRQWSarcopterygii (superclass)U4/U6 small nuclear ribonucleoprotein PRP3
8ZH5UMammalia (class)U4/U6 small nuclear ribonucleoprotein PRP3
4RS0JEuarchontoglires (superorder)U4/U6 small nuclear ribonucleoprotein PRP3
504AIPrimates (order)U4/U6 small nuclear ribonucleoprotein PRP3
9889NHaplorrhini (suborder)U4/U6 small nuclear ribonucleoprotein PRP3
BV263Simiiformes (infraorder)U4/U6 small nuclear ribonucleoprotein PRP3
9EIPNCatarrhini (parvorder)U4/U6 small nuclear ribonucleoprotein PRP3
H4XN5Bilateria (clade)U4/U6 small nuclear ribonucleoprotein PRP3,peroxidase [EC:1.11.1.7]
9FEEPVertebrata (clade)U4/U6 small nuclear ribonucleoprotein PRP3
7GD3BOpisthokonta (clade)U4/U6 small nuclear ribonucleoprotein PRP3,F-type H+-transporting ATPase subunit k,peroxidase [EC:1.11.1.7]
FXA8SHominoidea (superfamily)U4/U6 small nuclear ribonucleoprotein PRP3
5N7JJHominidae (family)U4/U6 small nuclear ribonucleoprotein PRP3
5Y8YCHomininae (subfamily)U4/U6 small nuclear ribonucleoprotein PRP3

The SMART diagram above represents a summary of the results shown below. Domains with scores less significant than established cutoffs are not shown in the diagram. Features are also not shown when two or more occupy the same piece of sequence; the priority for display is given by SMART > PFAM > PROSPERO repeats > Signal peptide > Transmembrane > Coiled coil > Low complexity. In either case, features not shown in the above diagram are listed in the right side table below, and the reason for their omission is shown in the 'Reason' column.

Confidently predicted domains, repeats, motifs and features:

Outlier homologues and homologues of known structure:

Features NOT shown in the diagram: