Domains within Hydrogenovibrio crunogenus XCL-2 protein Q31E96_HYDCU (Q31E96)
Diguanylate cyclase (GGDEF domain)
Alternative representations: 1 /
| Protein length | 775 aa |
|---|---|
| Source database | UniProt |
| Identifiers | Q31E96_HYDCU, Q31E96 |
Domain architecture analysis
Display all proteins with similar:
| Domain organisation | Proteins having all the domains as the query in the same order. Additional domains are allowed. |
|---|---|
| Domain composition | Proteins with the same domain composition have at least one copy of each of the domains of the query. |
Predicted functional partners
Q31E96_HYDCU is shown as 
Tcr_1937 in the network
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The network on the left comes from STRING, a database of known and predicted protein interactions. Displayed here is the evidence view, where different line colors represent the types of evidence for the association.
Protein Q31E96_HYDCU is possibly involved in these pathways, based on its similarity to the listed KEGG orthologous groups:
KEGG pathways
| Pathway | Description | |
|---|---|---|
| map02020 | Two-component system | |
| map02010 | ABC transporters | |
| map02025 | Biofilm formation - Pseudomonas aeruginosa |
KEGG orthologous groups
| KO | Name | Description | |
|---|---|---|---|
| K02051 | ABC.SN.S | NitT/TauT family transport system substrate-binding protein | |
| K13590 | dgcB | diguanylate cyclase [EC:2.7.7.65] | |
| K03406 | mcp | methyl-accepting chemotaxis protein | |
| K02030 | ABC.PA.S | polar amino acid transport system substrate-binding protein | |
| K07678 | barA, gacS, varS | two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] |
Orthologous groups
Orthology information is taken from eggNOG, a database of orthologous groups of genes. Orthologous groups containing this protein are listed below. This protein is named 317025.Tcr_1937 in eggNOG.
| OG | Taxonomic class | Description |
|---|---|---|
| LCOG2199 | All organisms (root) | diguanylate cyclase [EC:2.7.7.65],two-component system, cell cycle response regulator [EC:2.7.7.65],c-di-GMP phosphodiesterase [EC:3.1.4.52] |
| LCOG0834 | All organisms (root) | polar amino acid transport system substrate-binding protein,L-cystine transport system substrate-binding protein,general L-amino acid transport system substrate-binding protein |
| LCOG0715 | All organisms (root) | NitT/TauT family transport system substrate-binding protein,sulfonate transport system substrate-binding protein,nitrate/nitrite transport system substrate-binding protein |
| COG2199 | Bacteria (superkingdom) | diguanylate cyclase [EC:2.7.7.65],two-component system, cell cycle response regulator [EC:2.7.7.65],c-di-GMP phosphodiesterase [EC:3.1.4.52] |
| COG0834 | Bacteria (superkingdom) | polar amino acid transport system substrate-binding protein,L-cystine transport system substrate-binding protein,general L-amino acid transport system substrate-binding protein |
| COG0715 | Bacteria (superkingdom) | NitT/TauT family transport system substrate-binding protein,sulfonate transport system substrate-binding protein,nitrate/nitrite transport system substrate-binding protein |
| 63FPC | Proteobacteria (phylum) | methyl-accepting chemotaxis protein,diguanylate cyclase [EC:2.7.7.65],two-component system, sensor histidine kinase [EC:2.7.13.3] |
| ESDPY | Gammaproteobacteria (class) | two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3],diguanylate cyclase [EC:2.7.7.65],two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] |
| A9Q24 | Thiotrichales (order) | SBP_bac_3,GGDEF,NMT1 |
| 9ZUYM | Piscirickettsiaceae (family) | SBP_bac_3,GGDEF,NMT1 |
| DR7GU | Hydrogenovibrio (genus) | NMT1,SBP_bac_3,GGDEF |
The SMART diagram above represents a summary of the results shown below. Domains with scores less significant than established cutoffs are not shown in the diagram. Features are also not shown when two or more occupy the same piece of sequence; the priority for display is given by SMART > PFAM > PROSPERO repeats > Signal peptide > Transmembrane > Coiled coil > Low complexity. In either case, features not shown in the above diagram are listed in the right side table below, and the reason for their omission is shown in the 'Reason' column.