Domains within Candidatus Pelagibacter ubique HTCC1062 protein Q4FPP6_PELUB (Q4FPP6)
Ammonium transporter
Alternative representations: 1 /
| Protein length | 711 aa |
|---|---|
| Source database | UniProt |
| Identifiers | Q4FPP6_PELUB, Q4FPP6 |
Domain architecture analysis
Display all proteins with similar:
| Domain organisation | Proteins having all the domains as the query in the same order. Additional domains are allowed. |
|---|---|
| Domain composition | Proteins with the same domain composition have at least one copy of each of the domains of the query. |
This domain architecture was probably invented with the emergence of Bacteria
Predicted functional partners
Q4FPP6_PELUB is shown as 
AAZ20874.1 in the network
Click and drag to pan the network, and zoom by using your mouse wheel. Click the protein nodes for additional options.
The network on the left comes from STRING, a database of known and predicted protein interactions. Displayed here is the evidence view, where different line colors represent the types of evidence for the association.
Protein Q4FPP6_PELUB is possibly involved in these pathways, based on its similarity to the listed KEGG orthologous groups:
KEGG pathways
| Pathway | Description | |
|---|---|---|
| map02020 | Two-component system |
KEGG orthologous groups
| KO | Name | Description | |
|---|---|---|---|
| K03406 | mcp | methyl-accepting chemotaxis protein | |
| K13587 | cckA | two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] | |
| K11527 | K11527 | two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] | |
| K03320 | amt, AMT, MEP | ammonium transporter, Amt family | |
| K03407 | cheA | two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] |
Orthologous groups
Orthology information is taken from eggNOG, a database of orthologous groups of genes. Orthologous groups containing this protein are listed below. This protein is named 335992.SAR11_0049 in eggNOG.
| OG | Taxonomic class | Description |
|---|---|---|
| LCOG2198 | All organisms (root) | two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3],two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3],histidine phosphotransfer protein HptB |
| LCOG0004 | All organisms (root) | ammonium transporter, Amt family,ammonium transporter Rh,exosome complex component CSL4 |
| 738MP | All organisms (root) | two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3],chemosensory pili system protein ChpA (sensor histidine kinase/response regulator),two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE |
| COG0643 | Bacteria (superkingdom) | two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3],chemosensory pili system protein ChpA (sensor histidine kinase/response regulator),two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE |
| COG0004 | Bacteria (superkingdom) | ammonium transporter, Amt family,ammonium transporter Rh,two-component system, sensor histidine kinase [EC:2.7.13.3] |
| COG2198 | Bacteria (superkingdom) | two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3],two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3],histidine phosphotransfer protein HptB |
| 63FPC | Proteobacteria (phylum) | methyl-accepting chemotaxis protein,diguanylate cyclase [EC:2.7.7.65],two-component system, sensor histidine kinase [EC:2.7.13.3] |
| 7ZXY2 | Alphaproteobacteria (class) | two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3],two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3],two-component system, sensor histidine kinase [EC:2.7.13.3] |
| 50937 | Pelagibacteraceae (family) | ammonium transporter, Amt family |
The SMART diagram above represents a summary of the results shown below. Domains with scores less significant than established cutoffs are not shown in the diagram. Features are also not shown when two or more occupy the same piece of sequence; the priority for display is given by SMART > PFAM > PROSPERO repeats > Signal peptide > Transmembrane > Coiled coil > Low complexity. In either case, features not shown in the above diagram are listed in the right side table below, and the reason for their omission is shown in the 'Reason' column.