Domains within Nocardia farcinica IFM 10152 protein Q5YUK5_NOCFA (Q5YUK5)
Uncharacterized protein
Alternative representations: 1 /
| Protein length | 415 aa |
|---|---|
| Source database | UniProt |
| Identifiers | Q5YUK5_NOCFA, Q5YUK5 |
Domain architecture analysis
Display all proteins with similar:
| Domain organisation | Proteins having all the domains as the query in the same order. Additional domains are allowed. |
|---|---|
| Domain composition | Proteins with the same domain composition have at least one copy of each of the domains of the query. |
This domain architecture was probably invented with the emergence of Bacteria
Predicted functional partners
Q5YUK5_NOCFA is shown as 
NFA_32890 in the network
Click and drag to pan the network, and zoom by using your mouse wheel. Click the protein nodes for additional options.
The network on the left comes from STRING, a database of known and predicted protein interactions. Displayed here is the evidence view, where different line colors represent the types of evidence for the association.
Protein Q5YUK5_NOCFA is possibly involved in these pathways, based on its similarity to the listed KEGG orthologous groups:
Orthologous groups
Orthology information is taken from eggNOG, a database of orthologous groups of genes. Orthologous groups containing this protein are listed below. This protein is named 247156.NFA_32890 in eggNOG.
| OG | Taxonomic class | Description |
|---|---|---|
| LCOG2202 | All organisms (root) | methyl-accepting chemotaxis protein,diguanylate cyclase [EC:2.7.7.65],aerotaxis receptor |
| LCOG2208 | All organisms (root) | phosphoserine phosphatase RsbU/P [EC:3.1.3.3],two-component system, HptB-dependent secretion and biofilm response regulator,phosphoserine phosphatase RsbX [EC:3.1.3.3] |
| COG2202 | Bacteria (superkingdom) | methyl-accepting chemotaxis protein,diguanylate cyclase [EC:2.7.7.65],aerotaxis receptor |
| COG2208 | Bacteria (superkingdom) | phosphoserine phosphatase RsbU/P [EC:3.1.3.3],two-component system, HptB-dependent secretion and biofilm response regulator,phosphoserine phosphatase RsbX [EC:3.1.3.3] |
| 6AKCM | Actinobacteria (phylum) | phosphoserine phosphatase RsbU/P [EC:3.1.3.3],serine/threonine-protein kinase RsbW [EC:2.7.11.1] |
| F9T1G | Actinomycetia (class) | phosphoserine phosphatase RsbU/P [EC:3.1.3.3] |
| EN5AD | Corynebacteriales (order) | phosphoserine phosphatase RsbU/P [EC:3.1.3.3] |
| AG18J | Nocardiaceae (family) | phosphoserine phosphatase RsbU/P [EC:3.1.3.3] |
| G7ZZP | Nocardia (genus) | phosphoserine phosphatase RsbU/P [EC:3.1.3.3] |
The SMART diagram above represents a summary of the results shown below. Domains with scores less significant than established cutoffs are not shown in the diagram. Features are also not shown when two or more occupy the same piece of sequence; the priority for display is given by SMART > PFAM > PROSPERO repeats > Signal peptide > Transmembrane > Coiled coil > Low complexity. In either case, features not shown in the above diagram are listed in the right side table below, and the reason for their omission is shown in the 'Reason' column.