Domains within Nocardia farcinica IFM 10152 protein RL24_NOCFA (Q5Z1S1)

50S ribosomal protein L24

Alternative representations: 1 /

Protein length104 aa
Source databaseUniProt
Identifiers A0A0H5P996_NOCFR, A0A0H5P996, A0A2A7UKW8_9NOCA, A0A2A7UKW8, RL24_NOCFA, Q5Z1S1

Domain architecture analysis

Display all proteins with similar:

Domain organisationProteins having all the domains as the query in the same order. Additional domains are allowed.
Domain compositionProteins with the same domain composition have at least one copy of each of the domains of the query.

This domain architecture was probably invented with the emergence of cellular organisms

Predicted functional partners

RL24_NOCFA is shown as rplX in the network

Click and drag to pan the network, and zoom by using your mouse wheel. Click the protein nodes for additional options.

The network on the left comes from STRING, a database of known and predicted protein interactions. Displayed here is the evidence view, where different line colors represent the types of evidence for the association.

Open the STRING annotation page for rplX

Protein RL24_NOCFA is possibly involved in these pathways, based on its similarity to the listed KEGG orthologous groups:

KEGG pathways

PathwayDescription
map03010Ribosome

KEGG orthologous groups

KONameDescription
K02895RP-L24, MRPL24, rplXlarge subunit ribosomal protein L24

Orthologous groups

Orthology information is taken from eggNOG, a database of orthologous groups of genes. Orthologous groups containing this protein are listed below. This protein is named 247156.NFA_7750 in eggNOG.

OGTaxonomic classDescription
LCOG0198All organisms (root)large subunit ribosomal protein L24,large subunit ribosomal protein L26e,calcium uptake protein 3, mitochondrial
COG0198Bacteria (superkingdom)large subunit ribosomal protein L24
69N54Actinobacteria (phylum)large subunit ribosomal protein L24
FARYTActinomycetia (class)large subunit ribosomal protein L24
ENA18Corynebacteriales (order)large subunit ribosomal protein L24
AG9ESNocardiaceae (family)large subunit ribosomal protein L24
G7W3GNocardia (genus)large subunit ribosomal protein L24

The SMART diagram above represents a summary of the results shown below. Domains with scores less significant than established cutoffs are not shown in the diagram. Features are also not shown when two or more occupy the same piece of sequence; the priority for display is given by SMART > PFAM > PROSPERO repeats > Signal peptide > Transmembrane > Coiled coil > Low complexity. In either case, features not shown in the above diagram are listed in the right side table below, and the reason for their omission is shown in the 'Reason' column.

Confidently predicted domains, repeats, motifs and features:

Outlier homologues and homologues of known structure:

Features NOT shown in the diagram: