Domains within Bdellovibrio bacteriovorus HD100 protein Q6MGR7_BDEBA (Q6MGR7)
Pyrimidine-nucleoside phosphorylase
Alternative representations: 1 /
| Protein length | 439 aa |
|---|---|
| Source database | UniProt |
| Identifiers | Q6MGR7_BDEBA, Q6MGR7 |
Domain architecture analysis
Display all proteins with similar:
| Domain organisation | Proteins having all the domains as the query in the same order. Additional domains are allowed. |
|---|---|
| Domain composition | Proteins with the same domain composition have at least one copy of each of the domains of the query. |
Predicted functional partners
Q6MGR7_BDEBA is shown as 
pdp in the network
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The network on the left comes from STRING, a database of known and predicted protein interactions. Displayed here is the evidence view, where different line colors represent the types of evidence for the association.
Protein Q6MGR7_BDEBA is possibly involved in these pathways, based on its similarity to the listed KEGG orthologous groups:
KEGG pathways
| Pathway | Description | |
|---|---|---|
| map00240 | Pyrimidine metabolism | iPath3 |
KEGG orthologous groups
| KO | Name | Description | |
|---|---|---|---|
| K00756 | pdp | pyrimidine-nucleoside phosphorylase [EC:2.4.2.2] | iPath3 |
| K00758 | deoA, TYMP | thymidine phosphorylase [EC:2.4.2.4] | iPath3 |
Orthologous groups
Orthology information is taken from eggNOG, a database of orthologous groups of genes. Orthologous groups containing this protein are listed below. This protein is named 264462.Bd3855 in eggNOG.
| OG | Taxonomic class | Description |
|---|---|---|
| LCOG0213 | All organisms (root) | thymidine phosphorylase [EC:2.4.2.4],pyrimidine-nucleoside phosphorylase [EC:2.4.2.2],AMP phosphorylase [EC:2.4.2.57] |
| COG0213 | Bacteria (superkingdom) | thymidine phosphorylase [EC:2.4.2.4],pyrimidine-nucleoside phosphorylase [EC:2.4.2.2],ribose 1,5-bisphosphokinase [EC:2.7.4.23] |
| 5YK6A | Proteobacteria (phylum) | thymidine phosphorylase [EC:2.4.2.4],pyrimidine-nucleoside phosphorylase [EC:2.4.2.2] |
| FD73N | Oligoflexia (class) | pyrimidine-nucleoside phosphorylase [EC:2.4.2.2] |
| E1ZCA | Bdellovibrionales (order) | pyrimidine-nucleoside phosphorylase [EC:2.4.2.2] |
| 5M3MG | Bdellovibrio (genus) | pyrimidine-nucleoside phosphorylase [EC:2.4.2.2] |
| 6IGZ8 | Bdellovibrio bacteriovorus (species) | pyrimidine-nucleoside phosphorylase [EC:2.4.2.2] |
The SMART diagram above represents a summary of the results shown below. Domains with scores less significant than established cutoffs are not shown in the diagram. Features are also not shown when two or more occupy the same piece of sequence; the priority for display is given by SMART > PFAM > PROSPERO repeats > Signal peptide > Transmembrane > Coiled coil > Low complexity. In either case, features not shown in the above diagram are listed in the right side table below, and the reason for their omission is shown in the 'Reason' column.