Domains within Homo sapiens protein PXDC2_HUMAN (Q6UX71)

Plexin domain-containing protein 2

Alternative representations: 1 /

Protein length529 aa
Source databaseUniProt
Identifiers PXDC2_HUMAN, Q6UX71, ENSP00000366460.3, ENSP00000366460, Q96E59, Q96PD9, Q96SU9, Q6UX71-3
Source gene ENSG00000120594
Alternative splicing Q6UX71-2, PXDC2_HUMAN

Domain architecture analysis

Display all proteins with similar:

Domain organisationProteins having all the domains as the query in the same order. Additional domains are allowed.
Domain compositionProteins with the same domain composition have at least one copy of each of the domains of the query.

This domain architecture was probably invented with the emergence of Eukaryota

Predicted functional partners

PXDC2_HUMAN is shown as PLXDC2 in the network

Click and drag to pan the network, and zoom by using your mouse wheel. Click the protein nodes for additional options.

The network on the left comes from STRING, a database of known and predicted protein interactions. Displayed here is the evidence view, where different line colors represent the types of evidence for the association.

Open the STRING annotation page for PLXDC2

Protein PXDC2_HUMAN is possibly involved in these pathways, based on its similarity to the listed KEGG orthologous groups:

KEGG pathways

PathwayDescription
map03018RNA degradation

KEGG orthologous groups

KONameDescription
K12586RRP43, EXOSC8, OIP2exosome complex component RRP43

Post-translational modifications

PTM annotation is taken from PTMcode, a resource of known and predicted functional associations between protein post-translational modifications (PTMs). There are 9 PTMs annotated in this protein:

PTMCount
Phosphorylation5
N-linked glycosylation3
Ubiquitination1

To see the full details, including possible functional associations between the PTMs, please visit the PTMcode annotation page for protein PLXDC2.

Orthologous groups

Orthology information is taken from eggNOG, a database of orthologous groups of genes. Orthologous groups containing this protein are listed below. This protein is named 9606.ENSP00000366460 in eggNOG.

OGTaxonomic classDescription
LKOG3848All organisms (root)exosome complex component RRP43
KOG3848Eukaryota (superkingdom)exosome complex component RRP43
HTVC5Metazoa (kingdom)exosome complex component RRP43
94IV3Chordata (phylum)PSI,Arf
5R7H9Sarcopterygii (superclass)PSI
8YX6VMammalia (class)PSI
4R4QCEuarchontoglires (superorder)PSI
4ZZQZPrimates (order)PSI
98PURHaplorrhini (suborder)PSI
BV1R6Simiiformes (infraorder)PSI
9EHEMCatarrhini (parvorder)PSI
H584KBilateria (clade)exosome complex component RRP43
7I8IGOpisthokonta (clade)exosome complex component RRP43
9G3ECVertebrata (clade)PSI,Arf
FX4HTHominoidea (superfamily)PSI
5N9R4Hominidae (family)PSI
5XVGJHomininae (subfamily)PSI

The SMART diagram above represents a summary of the results shown below. Domains with scores less significant than established cutoffs are not shown in the diagram. Features are also not shown when two or more occupy the same piece of sequence; the priority for display is given by SMART > PFAM > PROSPERO repeats > Signal peptide > Transmembrane > Coiled coil > Low complexity. In either case, features not shown in the above diagram are listed in the right side table below, and the reason for their omission is shown in the 'Reason' column.

Confidently predicted domains, repeats, motifs and features:

Outlier homologues and homologues of known structure:

Features NOT shown in the diagram: