Domains within Homo sapiens protein LRRC4_HUMAN (Q9HBW1)

Leucine-rich repeat-containing protein 4

Alternative representations: 1 /

Protein length653 aa
Source databaseUniProt
Identifiers LRRC4_HUMAN, Q9HBW1, ENSP00000249363.3, ENSP00000249363, A4D0Y9, Q14DU9, Q6ZMI8, Q96A85, K7C1L6_PANTR, K7C1L6, C9J7K7_HUMAN, C9J7K7, A0A2J8QWY4_PANTR, A0A2J8QWY4, C9JA92_HUMAN, C9JA92, A0A2J8QWX5_PANTR, A0A2J8QWX5
Source gene ENSG00000128594
Alternative splicing LRRC4_HUMAN, ENSP00000418254.1, ENSP00000418093.1, ENSP00000417795.1

Domain architecture analysis

Display all proteins with similar:

Domain organisationProteins having all the domains as the query in the same order. Additional domains are allowed.
Domain compositionProteins with the same domain composition have at least one copy of each of the domains of the query.

This domain architecture was probably invented with the emergence of Chordata

Predicted functional partners

LRRC4_HUMAN is shown as LRRC4 in the network

Click and drag to pan the network, and zoom by using your mouse wheel. Click the protein nodes for additional options.

The network on the left comes from STRING, a database of known and predicted protein interactions. Displayed here is the evidence view, where different line colors represent the types of evidence for the association.

Open the STRING annotation page for LRRC4

Protein LRRC4_HUMAN is possibly involved in these pathways, based on its similarity to the listed KEGG orthologous groups:

KEGG pathways

PathwayDescription
map04360Axon guidance
map04514Cell adhesion molecules

KEGG orthologous groups

KONameDescription
K22038LRRC8volume-regulated anion channel
K07523LRRC4C, NGL1netrin-G1 ligand
K16351LRRC4, NGL2netrin-G2 ligand

Post-translational modifications

PTM annotation is taken from PTMcode, a resource of known and predicted functional associations between protein post-translational modifications (PTMs). There are 12 PTMs annotated in this protein:

PTMCount
Phosphorylation12

To see the full details, including possible functional associations between the PTMs, please visit the PTMcode annotation page for protein ENSPTRG00000019656.

Orthologous groups

Orthology information is taken from eggNOG, a database of orthologous groups of genes. Orthologous groups containing this protein are listed below. This protein is named 9606.ENSP00000249363 in eggNOG.

OGTaxonomic classDescription
LCOG1552All organisms (root)volume-regulated anion channel,leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein,protein phosphatase 1 regulatory subunit 7
KOG0619Eukaryota (superkingdom)volume-regulated anion channel,leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein,leucine-rich repeat transmembrane protein FLRT
HT6CPMetazoa (kingdom)netrin-G1 ligand,netrin-G2 ligand,vasorin
93F0FChordata (phylum)netrin-G1 ligand,netrin-G2 ligand,vasorin
5RA7ZSarcopterygii (superclass)netrin-G1 ligand,netrin-G2 ligand,vasorin
8Z9Y6Mammalia (class)netrin-G2 ligand
4R74VEuarchontoglires (superorder)netrin-G2 ligand
4ZR1APrimates (order)netrin-G2 ligand
98KB0Haplorrhini (suborder)netrin-G2 ligand
BVCR8Simiiformes (infraorder)netrin-G2 ligand
9ETAUCatarrhini (parvorder)netrin-G2 ligand
7IK4JOpisthokonta (clade)netrin-G1 ligand,netrin-G2 ligand,leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
H6TYVBilateria (clade)netrin-G1 ligand,netrin-G2 ligand,vasorin
9FNI5Vertebrata (clade)netrin-G2 ligand,vasorin,netrin-G3 ligand
FX8MWHominoidea (superfamily)netrin-G2 ligand
5MXVSHominidae (family)netrin-G2 ligand
5XY3PHomininae (subfamily)netrin-G2 ligand

The SMART diagram above represents a summary of the results shown below. Domains with scores less significant than established cutoffs are not shown in the diagram. Features are also not shown when two or more occupy the same piece of sequence; the priority for display is given by SMART > PFAM > PROSPERO repeats > Signal peptide > Transmembrane > Coiled coil > Low complexity. In either case, features not shown in the above diagram are listed in the right side table below, and the reason for their omission is shown in the 'Reason' column.

Confidently predicted domains, repeats, motifs and features:

Outlier homologues and homologues of known structure:

Features NOT shown in the diagram: