Domains within Drosophila melanogaster protein NEDD8_DROME (Q9VJ33)

NEDD8

Alternative representations: 1 /

Protein length84 aa
Source databaseUniProt
Identifiers NEDD8_DROME, Q9VJ33, FBPP0309711, FBPP0080733, Q29QE5, A0A0J9TQZ0_DROSI, A0A0J9TQZ0, X2J935_DROME, X2J935
Source gene FBgn0032725

Domain architecture analysis

Display all proteins with similar:

Domain organisationProteins having all the domains as the query in the same order. Additional domains are allowed.
Domain compositionProteins with the same domain composition have at least one copy of each of the domains of the query.

This domain architecture was probably invented with the emergence of Eukaryota

Predicted functional partners

NEDD8_DROME is shown as Nedd8 in the network

Click and drag to pan the network, and zoom by using your mouse wheel. Click the protein nodes for additional options.

The network on the left comes from STRING, a database of known and predicted protein interactions. Displayed here is the evidence view, where different line colors represent the types of evidence for the association.

Open the STRING annotation page for Nedd8

Protein NEDD8_DROME is possibly involved in these pathways, based on its similarity to the listed KEGG orthologous groups:

KEGG pathways

PathwayDescription
map00600Sphingolipid metabolism iPath3
map04141Protein processing in endoplasmic reticulum
Some of these pathways are included in the interactive Pathways Explorer overview maps. Select an overview map and click the button below to highlight them in iPath.

KEGG orthologous groups

KONameDescription
K12158NEDD8ubiquitin-like protein Nedd8
K04523UBQLN, DSK2ubiquilin

Post-translational modifications

PTM annotation is taken from PTMcode, a resource of known and predicted functional associations between protein post-translational modifications (PTMs). There are 19 PTMs annotated in this protein:

PTMCount
Ubiquitination9
Neddylation4
Phosphorylation4
Isopeptide bond1
Acetylation1

To see the full details, including possible functional associations between the PTMs, please visit the PTMcode annotation page for protein Nedd8.

Orthologous groups

Orthology information is taken from eggNOG, a database of orthologous groups of genes. Orthologous groups containing this protein are listed below. This protein is named 7227.FBpp0309711 in eggNOG.

OGTaxonomic classDescription
FDX93melanogaster subgroup (species subgroup)ubiquitin-like protein Nedd8
EICPGEndopterygota (cohort)ubiquitin-like protein Nedd8
FV3E5melanogaster group (species group)ubiquitin-like protein Nedd8
LCOG5272All organisms (root)ubiquilin,UV excision repair protein RAD23,ubiquitin-small subunit ribosomal protein S27Ae
KOG0005Eukaryota (superkingdom)ubiquitin-like protein Nedd8,amino-acid N-acetyltransferase [EC:2.3.1.1],3-dehydrosphinganine reductase [EC:1.1.1.102]
HTX8YMetazoa (kingdom)ubiquitin-like protein Nedd8,3-dehydrosphinganine reductase [EC:1.1.1.102]
HHQ97Arthropoda (phylum)ubiquitin-like protein Nedd8
85QC9Hexapoda (subphylum)ubiquitin-like protein Nedd8
AH6E0Neoptera (infraclass)ubiquitin-like protein Nedd8
ANEZQDiptera (order)ubiquitin-like protein Nedd8
7IZRPOpisthokonta (clade)ubiquitin-like protein Nedd8,amino-acid N-acetyltransferase [EC:2.3.1.1],3-dehydrosphinganine reductase [EC:1.1.1.102]
H6E1HBilateria (clade)ubiquitin-like protein Nedd8,3-dehydrosphinganine reductase [EC:1.1.1.102]
EGZNYDrosophila (genus)ubiquitin-like protein Nedd8
50NVVSophophora (subgenus)ubiquitin-like protein Nedd8

The SMART diagram above represents a summary of the results shown below. Domains with scores less significant than established cutoffs are not shown in the diagram. Features are also not shown when two or more occupy the same piece of sequence; the priority for display is given by SMART > PFAM > PROSPERO repeats > Signal peptide > Transmembrane > Coiled coil > Low complexity. In either case, features not shown in the above diagram are listed in the right side table below, and the reason for their omission is shown in the 'Reason' column.

Confidently predicted domains, repeats, motifs and features:

Outlier homologues and homologues of known structure:

Features NOT shown in the diagram: