PGRP

PGRP

Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme.
SMART ACC:SM000701
Description:The bacteriophage molecule, but not its moth homologue, has been shown to have N-acetylmuramoyl-L-alanine amidase activity. One member of this family, Tag7, is a cytokine.
InterPro ACC:IPR006619
InterPro abstract:

This domain is found in a family of animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme [ PUBMED:9707603 ], and some bacterial homologues. The bacteriophage molecule, but not its moth homologue, has been shown to have N-acetylmuramoyl-L-alanine amidase activity. One member of this family … expand

GO process:peptidoglycan catabolic process (GO:0009253)
GO function:zinc ion binding (GO:0008270), N-acetylmuramoyl-L-alanine amidase activity (GO:0008745)
Family alignment:View the Family alignment or the Alignment consensus sequence
There are 5 568 PGRP domains in 5 206 proteins in SMART's NRDB database.

Taxonomic distribution of proteins containing PGRP domains

The tree below includes only several representative species and genera. The complete taxonomic breakdown of all proteins containing PGRP domains can be accessed here. Click the counts or percentage values to display the corresponding proteins.

Predicted cellular role

Binding / catalysis:Peptidoglycan-binding

Relevant references for this domain

Primary literature for the PGRP domain is listed below. Automatically-derived, secondary literature is also available.

KEGG pathways involving proteins which contain this domain

This information is based on the mapping of SMART genomic protein database to KEGG orthologous groups. Percentages are related to the number of proteins containing a PGRP domain which could be assigned to a KEGG orthologous group, and not all proteins containing PGRP domains. Please note that proteins can be included in multiple pathways, ie. the numbers below will not add to 100%.

KEGG pathways

Some of these pathways are included in the interactive Pathways Explorer overview maps. Select an overview map and click the button below to highlight them in iPath.

KEGG orthologous groups

Some of these KOs are included in the interactive Pathways Explorer overview maps. Select an overview map and click the button below to highlight them in iPath.

3D structures in PDB containing this domain

Links to other resources describing this domain

InterProIPR006619