The domain within your query sequence starts at position 206 and ends at position 909; the E-value for the Nup84_Nup100 domain shown below is 2.4e-226.
SMLWLLQQEMVTWRLLASLYRDRIQSSLEEENMFAIAGINASEKMVVETLFQRDSLVRQS QLVVDWLESIAKDEIGEFSDNIEFYAKSVYWENTLHSLKQRQLLSHMGSTRPLVTELDPD APIRQKLPLDDLDREDEVRLLKYLFTLIRAGMTEEAQRLCKRCGQAWRAATLEGWKLYHD PNVNGGTELEPVEGNPYRRIWKISCWRMAEDELFNKYERAIYAALSGNLKQLLPVCDTWE DTVWAYFRVMVDSLVEQEIRTSVMTQDDSEELPREYMEANWTLEKVFEELQATDKKRVLE ENQEHYHIVQKFLILGDVDGLMDEFSKWLSKSGSSLPGHLLRFMTHLILFLRTLGLQTKE EVSIEVLKTYIQLLISEKHTSLIAFYTCHLPQDLAVAQYALFLEGVTEFEQRHQCLELAK EADLDVATITKTVVENICKKDNGEFSHHDLAPSLDTGTTEEDRLKIDVIDWLVFDPAQRA EALRQGNAIMRKFLALKKHEAAKEVFVKIPQDSIAEIYNQWEEQGMESPLPAEDDNAIRE HLCIRAYLEAHETFNEWFKHMNSAPQKPTLLSQATFTEKVAYEHREKKYEMDHNIWKGHL DALTADVKEKMYNVLLFVDGGWMVDVREDAEDDPERTHQMVLLRKLCLPMLCFLLHTILH STGQYQECLQLADMVSSERHKLYLVFSKEELRKLLQKLRESSLM
Nup84_Nup100 |
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PFAM accession number: | PF04121 |
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Interpro abstract (IPR007252): | Nup84 forms a complex with five proteins, including Nup120, Nup85, Sec13, and a Sec13 homologue. This Nup84 complex in conjunction with Sec13-type proteins is required for correct nuclear pore biogenesis [ (PUBMED:8565072) ]. Nup107 is the vertebrate homologue of Nup84. The Nup107-160 complex (Nup84 complex in yeast) forms the cytoplasmic and nucleoplasmic rings of the nuclear pore complex (NPC) scaffold, which consists of three stacked rings [ (PUBMED:24315095) ]. |
GO component: | nuclear pore (GO:0005643) |
GO function: | structural constituent of nuclear pore (GO:0017056) |
This is a PFAM domain. For full annotation and more information, please see the PFAM entry Nup84_Nup100