TLCTRAM, LAG1 and CLN8 homology domains. | |
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| SMART ACC: | SM000724 |
| Description: | Protein domain with at least 5 transmembrane alpha-helices. Lag1p and Lac1p are essential for acyl-CoA-dependent ceramide synthesis, TRAM is a subunit of the translocon and the CLN8 gene is mutated in Northern epilepsy syndrome. The family may possess multiple functions such as lipid trafficking, metabolism, or sensing. Trh homologues possess additional homeobox domains. |
| InterPro ACC: | IPR006634 |
| InterPro abstract: | TLC is a protein domain with at least 5 transmembrane α-helices. Lag1p and Lac1p are essential for acyl-CoA-dependent ceramide synthesis [ PUBMED:11694577 ], TRAM is a subunit of the translocon and the CLN8 gene is mutated in Northern epilepsy syndrome. Proteins containing this domain may possess multiple functions such … expand |
| GO component: | membrane (GO:0016020) |
| Family alignment: | View the Family alignment or the Alignment consensus sequence |
| There are 11 135 TLC domains in 11 114 proteins in SMART's NRDB database. | |
Taxonomic distribution of proteins containing TLC domains
The tree below includes only several representative species and genera. The complete taxonomic breakdown of all proteins containing TLC domains can be accessed here. Click the counts or percentage values to display the corresponding proteins.
Predicted cellular role
| Cellular role: | |
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| Binding / catalysis: | Unknown |
Relevant references for this domain
Primary literature for the TLC domain is listed below. Automatically-derived, secondary literature is also available.
KEGG pathways involving proteins which contain this domain
This information is based on the mapping of SMART genomic protein database to KEGG orthologous groups. Percentages are related to the number of proteins containing a TLC domain which could be assigned to a KEGG orthologous group, and not all proteins containing TLC domains. Please note that proteins can be included in multiple pathways, ie. the numbers below will not add to 100%.
KEGG pathways
KEGG orthologous groups
3D structures in PDB containing this domain
Links to other resources describing this domain
| InterPro | IPR006634 |
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