O28859/26-134 RILGFLGILLVMLII---------------PVHGAVIVV----------PDNKTIQEVID CONSENSUS/80% h..G.hh....h.......................shhh...............t.h.h. CONSENSUS/65% hh.Gthh.ththt..h..............htstsshhl..........ts.pssshshp CONSENSUS/50% tssGsshpststshph.hh...........tssssusll.........hssspssslslp O28859/26-134 SA------SDGDTVVV---------------RDGVYS----------------------- CONSENSUS/80% t.........G.hh...................Gh..t...................... CONSENSUS/65% s.t......pGhhht.................sGhhhpt..t.................. CONSENSUS/50% uss.....spGsphss.............tthsGsslsshssthh............... O28859/26-134 --------------VYLNITKSITLRS-------------ENGTANCILEA--------- CONSENSUS/80% ...............h.N........................G................. CONSENSUS/65% ...........t.hhhtNhhhtt.................ttGhhhpsstt......... CONSENSUS/50% ..........tpshhhsNsthst.................ssGlshssssps........ O28859/26-134 --------STNDDVIEVHADFVT------ITGFTIRNGN--------------------- CONSENSUS/80% .........tN.h.................tG.hh.t..t.................... CONSENSUS/65% .......h.tNph.st.............ssGhhhts.sssph.tt.............. CONSENSUS/50% ......thtsNphpspt............usGshhssssusslsssph.ts......... O28859/26-134 -DDGVDVE CONSENSUS/80% ..tG.... CONSENSUS/65% .tsGhhhh CONSENSUS/50% .ssGltss
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |