222523.BCE_1144_from_472_to_560LPPRTLTKISDRYLK------KYQKRI----HTKLQVNM--------------------- CONSENSUS/80% LstptlhpIlp..ht......tl.pph....t.pthpl...................... CONSENSUS/65% LspcplhpIlsh.hp......pLtcph....tpcslpl...................... CONSENSUS/50% Lsc-sltcIlcl.ls......pLp+pL....spcslsL...................... 222523.BCE_1144_from_472_to_560---NYTHGVS--DFIVEKAN------LTMG-VHGIKSYIEDDIYQSITNLR----ISGKI CONSENSUS/80% ...phsttsh..phlsp.uhp.......hG.ARsLcphlpp.l.s.hhp.........th CONSENSUS/65% ...phscpAh..chlAcpuhc......thG.ARsL+phlpphlps.lschh.......ph CONSENSUS/50% ...clo-cAl..chlAccGaD.....sshG.ARPL+RlIpcplc-sLu-tl....Ltsph 222523.BCE_1144_from_472_to_560EPGIIYQLTA--------SDELYL CONSENSUS/80% .tht.hhlsh.........tth.h CONSENSUS/65% tsspplhlsh.......ttsphhh CONSENSUS/50% psusplplch.......pssclsl
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |