AA21801|CAA218 VKQLGFEAP-TPIQQ--------------------QAWPMAMSG---------------- CONSENSUS/80% h.........h.hQ.....................tsh..hhtt................ CONSENSUS/65% htththhp..pshQt....................pslthhhpt................ CONSENSUS/50% hpppshtph.pshQp....................pulstlhps................ AA21801|CAA218 ----------------------------------------------------------RD CONSENSUS/80% ..........................................................tt CONSENSUS/65% ..........................................................ps CONSENSUS/50% ..........................................................ps AA21801|CAA218 M-VGISATGSGKTL-------SYCLPAIVHINAQPLLS---------------------- CONSENSUS/80% h.hh.s.sG.GKTh........h.h.hh..h............................. CONSENSUS/65% h.lltstsGsGKTh.......hhhhshhpthhpt.......................... CONSENSUS/50% s.llsusTGoGKTh.......shslsllpplppp.......................... AA21801|CAA218 ------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ AA21801|CAA218 ------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ AA21801|CAA218 ------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ AA21801|CAA218 ---------PGDGPIVLVLAPTRELAVQ-IQQECTKFGKSSR------------------ CONSENSUS/80% ...............hlhhsP.t.hh.p.h.pthtt.h...................... CONSENSUS/65% ...............slllsPpptLstp.hhpphpphh...................... CONSENSUS/50% ............thpsLllsPs+sLspQ.htcclpchstt.................... AA21801|CAA218 ------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ AA21801|CAA218 ------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ AA21801|CAA218 -------------------------------------------IRNTCVYGGVPR----- CONSENSUS/80% ..............................................h.hhts........ CONSENSUS/65% ............................................hhhhhhsu.p...... CONSENSUS/50% ...........................................hpssshhuGssh..... AA21801|CAA218 -GPQIRDLIRGV----------------------EICIATPG------------------ CONSENSUS/80% .......h.tt............ ..........tlhhso.t.................. CONSENSUS/65% .....tthtpt............ ..........plllsT.t.................. CONSENSUS/50% .ttphpplppss........... ..........clllsTss.................. AA21801|CAA218 ------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ AA21801|CAA218 ------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ AA21801|CAA218 ------------------------------------------RLLDMLDSNK-------- CONSENSUS/80% ...........................................h.p.h.t.......... CONSENSUS/65% ..........................................hhhphhtpt......... CONSENSUS/50% ..........................................plhctlpppt........ AA21801|CAA218 ----------------------TNLRRVTYLVL-DEADRMLDM----------------- CONSENSUS/80% ..........................ththllh.DEsc.h.................... CONSENSUS/65% ......................h.htphphlll.DEscphh................... CONSENSUS/50% ......................hphpphshlll.DEuHchts.................. AA21801|CAA218 -GFEPQIRKIVDQI---------------------------------------------- CONSENSUS/80% .t.t..h.thh................................................. CONSENSUS/65% .shtttltphhp.h.............................................. CONSENSUS/50% .stpsplpplhpth.............................................. AA21801|CAA218 ------------------------------------------------------------ CONSENSUS/80% . ................................. CONSENSUS/65% . ................................. CONSENSUS/50% . ................................. AA21801|CAA218 --------------RPDRQTVM-----FSATWP-----KEVQRLARDYLN------DYIQ CONSENSUS/80% ................t..hhh. houT................hh........... CONSENSUS/65% ................phphlh. hoAT.........hpphhphhhp......t.hh CONSENSUS/50% ...............pstphlh. hSATs.......plpphspphhs......shhp AA21801|CAA218 VTVGSLD-------------LAASHNIKQI CONSENSUS/80% h.........................ht.. CONSENSUS/65% h.st....................tthp.h CONSENSUS/50% lsssp.................sspslcph
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |