16505330 ----------------------------------------------------------MS CONSENSUS/80% ..........................................................hs CONSENSUS/65% ..........................................................Mo CONSENSUS/50% ..........................................................Mo 16505330 RPQR-------------------------------------------------------- CONSENSUS/80% lhph....ss...a.sp..............lRpp...........htp+.cA.ta...t CONSENSUS/65% lp+h....ssh.pWhsch.............lR+p...........FpsKtcApta...p CONSENSUS/50% I+Kp....ssu.pWpschhs.......pGcRlR+p........stpFcoKs-AptW...c 16505330 ------------------IKKMSLSKALDKYYATVSVHKRGHQQ--EFYRVRVIQ----- CONSENSUS/80% ..h.tt............t.phpht-hh..ahp..t.phps.pp..ph.plthh...... CONSENSUS/65% ttt.sp............tsppols-hlppahpthsppp+shpp..ctt+lphh...... CONSENSUS/50% ppphsc.ptt.ahtpp..scc+TLsEllccWhcchups++uscp..-ps+Lctl...... 16505330 RHPLAEK---MMDEITTVDIASYRDDRLSQ-------------------VNTRTG---RC CONSENSUS/80% .t.hst.....htphstt.hhphtpthhp.............................t. CONSENSUS/65% hpthuph...hhsplotptlspapsp+lp.............................ps CONSENSUS/50% pcpLuch...pls-lTspclscYR-cRLst........................t...cs 16505330 ISGNTVRLELALLSSLYNLASVEWGT-CRTNPVEMVRKPK----------ISGGRDRRLT CONSENSUS/80% hpssTlshchshlpthhphh.t.hth...tsPh..lch.c...........tttc.thLp CONSENSUS/65% lssuTlspchuhLsulhsthtpthta.htpsPlttl+p.+..........tspschpaLs CONSENSUS/50% lSsuTVNR-lAhLSulFspApc-acW.tssNPlptl+phK..........pscsRhRaLo 16505330 SQEERRLSRY----------------FQ--EQNPALHAIFHLAIETAMRQGEILSLRWEH CONSENSUS/80% .tE.ttLhtt................h........h..hshhsltTuhR.uph.tLphpp CONSENSUS/65% ssEhp+Llst................ht.....tpLh.lshlsLsTGhRhuElhsLchpp CONSENSUS/50% s-ElcRLLss................ss.tp.tscLtsllplALuTGhRpSEltsLcWpQ 16505330 IDLQHGVAHLPM---------TKNGSSRDVPLSR----KARHLLQGMTVA---------- CONSENSUS/80% l.htt+hsah...........oKstpshsVPlsp....phhthl.p.............. CONSENSUS/65% l.hpp+lsalp..........TKsGcsRsVPlop....cshphLpp.............. CONSENSUS/50% lshpcRlsalc..........TKuGKsRoVPLSc....cAhclLpct.s........... 16505330 -------LSGNVF-HYS-----------------SSGFKSAWRVALQRLNI--------- CONSENSUS/80% .......ppshlF.......................s..ttaptshpcsth......... CONSENSUS/65% .......ppuhlF......................tssptuacpAlc+ssl......... CONSENSUS/50% .......csGpVF..hp..................sssspAF+pAlcRAGI......... 16505330 ---------VDLHFHDLRHEAISRLFELGTLNVMEVAAISGHRSLNMLKR-YTHLRAYQL CONSENSUS/80% .........ts.thHsLRHphsShhh.tG.hsl..lpplhGapslphhhp.YsHhssptL CONSENSUS/65% .........ps.phHsLRHohAS+hh.sG.sslhhLpclhGHpslpMshR.YAHhusscL CONSENSUS/50% .........csh+aHDLRHTaAS+LhpsG.sslhsLpcIsGHpolpMltR.YAHLAP-+L 16505330 VSKLDARRRQTQKIA-PYFVPYPACIESVNEGSDGC-----CGFRVHLPDFDNLSVSAAS CONSENSUS/80% tptht..t.................................................... CONSENSUS/65% tptlp.hssh.t................................................ CONSENSUS/50% s-tls.lsslts................................................ 16505330 RESALEAAGVLLLRTLAKAAQRGERVPRPGDLPEGKHER--VMIHPLLSAA--------- CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ 16505330 --- CONSENSUS/80% ... CONSENSUS/65% ... CONSENSUS/50% ...
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |