cov pid 1 [ . . . . : . . . 80 1 16505330 100.0% 100.0% ----------------------------------------------------------MSRPQR---------------- 2 A0A0F2QU46_9PSED 96.9% 48.6% -------------------------------------------------------------------------------- 3 A0A0M3LRG1_9CAUD 70.8% 29.8% ---------------------------------------------------------MATIIKN----GN--KYRAQ--- 4 Q8XYV1_RALSO 71.3% 28.3% ---------------------------------------------------------MASIQKV----AT--GWRAQ--- 5 A0A0A1I5U0_9CAUD 72.1% 30.0% ---------------------------------------------------------MGTIVPREGFNGDV-TYQAK--- 6 B4EEA7_BURCJ 71.8% 29.6% ---------------------------------------------------------MATITKR----GPY-QWRAQ--- 7 V5UDF2_9BURK 72.1% 30.7% ---------------------------------------------------------MGTITKR----GDL-QWQAK--- 8 W6MYA3_9VIRU 71.5% 37.0% ---------------------------------------------------------MAYFEKR----GS--AWRAQ--- 9 J9Z8X1_LEPFM 77.3% 29.0% ---------------------------------------------------------MAAIRER----GSY-QWQAQ--- 10 Q88A62_PSESM 77.5% 26.6% MWAHHTQSR---------ALRGFRVSGWLCTNTVLWSKGTKSVQCWCASTPLESFQ-MATLVKT----PSG-TWKAL--- 11 A0A0F3IJY5_9GAMM 77.0% 21.4% ---------------------------------------------------------MATIKERTAKDGTA-RYTAE--- 12 C5CWK1_VARPS 85.1% 20.9% ---------------------------------------------------------MPTFKQL----PSG-NWRAQ--- 13 Q9T1R0_BPAPS 79.6% 16.6% ----------------------------------------------------------MSIFKR----GK--IWYGSYTT 14 J7SJD1_MORMO 78.9% 17.4% ----------------------------------------------------------MSIFKR----GN--SWYCDFAT 15 G8C7S0_9CAUD 78.9% 16.7% ----------------------------------------------------------MSITLR----GG--VWHCHFVT 16 A4W7K0_ENT38 78.9% 15.5% ----------------------------------------------------------MSITLR----GG--VWHCHFVT 17 K7P7R5_9CAUD 78.6% 18.1% ----------------------------------------------------------MSIKLR----GG--TWHCDFVA 18 A0A0E9M9A6_9PROT 76.2% 16.6% ----------------------------------------------------------MSLKKR----GN--TWYIDFVA 19 E5AKM7_BURRH 80.2% 18.0% MDVFD---------------------------DCVAALPCRRMDATGCAERSSRRSGKMSLYKR---DRSP-NWYYKLYP 20 Q45YI6_9CAUD 87.2% 16.8% MVVHDARNRVRMHPPPRTAGRKDR--------SSVGSRGCRRDRLAQTAIRKNR--WEMRFYKR---QKNG-PWWFDLS- 21 Q9T1P3_BPD3 80.2% 18.8% ----------------------------------------------------------MPYKRN----DSA-YWWISFKS 22 16505416 74.2% 17.6% ----------------------------------------------------------MSIRKQ----PNG-KWLCECYP 23 E5G6L0_9CAUD 73.4% 19.4% ----------------------------------------------------------MTVRKQ----PNG-KWLCECYP 24 E0SAL2_DICD3 79.6% 15.0% ----------------------------------------------------------MAVRKL----ASG-KWLCECYP 25 F1BUS9_9CAUD 75.5% 14.2% ----------------------------------------------------------MAIRKL----PEG-GWLSELYP 26 B2VHB7_ERWT9 74.9% 16.2% ----------------------------------------------------------MAIRKH----PSGVGWLSEIYP 27 A0A0A0Z398_9ENTR 74.7% 16.8% ----------------------------------------------------------MTVRKL----SDG-QWVADFYP 28 Q1I119_9CAUD 74.2% 17.6% ----------------------------------------------------------MGVRKDST--KGG-KWLAEFY- 29 C5BFY2_EDWI9 76.8% 16.5% ----------------------------------------------------------MTIRRL----ASG-KWLCQCFP 30 U5N0A8_9CAUD 71.5% 14.7% M------------------------------------------------VNTASEGFLMSIKKL----DDG-RYEVDIRP 31 A0A0F7LA05_9CAUD 72.1% 16.0% ----------------------------------------------------------MSIKKL----DDG-RYEVDVRP 32 A0A097QXD5_HAFAL 72.3% 16.3% ----------------------------------------------------------MSIKKL----DDG-RYEVDVRP 33 VINT_BPP2 73.1% 13.4% ----------------------------------------------------------MAIKKL----DDG-RYEVDIRP 34 A0A090ICP0_9GAMM 71.3% 16.8% ----------------------------------------------------------MSIKSI----PNG--YEVDCRP 35 E8TMK0_MESCW 85.6% 17.5% ---------------------------------------------------------MMTNEAI----QEG-ESSDHFSM consensus/100% ................................................................................ consensus/90% ..........................................................hsh........t...a..p... consensus/80% ..........................................................hslhph....ss...a.sp... consensus/70% ..........................................................holpch....ss..ta.sp... cov pid 81 . 1 . . . . : . 160 1 16505330 100.0% 100.0% ----------------------------------------------------------IKKMSLSKALDKYYATVSVHKR 2 A0A0F2QU46_9PSED 96.9% 48.6% -----------MR---------------------------------------------KKNLTLAEGLELYREKVSILKK 3 A0A0M3LRG1_9CAUD 70.8% 29.8% -----------VRKKGI----YKTATFSTKTEANRW---AYALEAQIDAGEYNT----TPNILFAELIDKYLKEVTPTKR 4 Q8XYV1_RALSO 71.3% 28.3% -----------ISVKG----QRDDRTFDTKSAAQEW---AVRREAELR--SIQGGQG-SKTHTVGDVLDEYQKSVSPTKR 5 A0A0A1I5U0_9CAUD 72.1% 30.0% -----------IRRTGF---PMQSRTFKTKKEAEQW---MREVEYGMDKGAFRVSSI-AQTATLKDMLETYRDKVSSKKK 6 B4EEA7_BURCJ 71.8% 29.6% -----------VRRHGY---PAQSKTFNTKVEAEAW---ANMIESEMSRGVWISRSE-AEATTLFEALKRYEKEVSSMKK 7 V5UDF2_9BURK 72.1% 30.7% -----------VRRKGF---PQQSRTFMYKEDAEKW---VRTVERELETSGFVDRRE-AEKNTLAEVLRRYQKEVTPQKK 8 W6MYA3_9VIRU 71.5% 37.0% -----------IRRKGH---PTLSATFDTKAEAQRW---AAEIEGDMSRSRFVDTRA-AMRTTLGKALEQYEREISEHKK 9 J9Z8X1_LEPFM 77.3% 29.0% -----------VIRKGF---PSQYKTFNNKSDAEKW---ARLIESEMDRGAFFSRKE-AENTTLSEALDRYLTEITEKKK 10 Q88A62_PSESM 77.5% 26.6% -----------IRKTGW---PTVAKTFRTKRDAEDW---SRRTEDEMVRGVYIQRSG-SERMTLEAALKRYLSDITPTKK 11 A0A0F3IJY5_9GAMM 77.0% 21.4% -----------IRLKGY---PAQTATFKRKTDAKKW---IQDTESAIREGRHFKTTE-AKRHTLGDLVDRYIKDVLPTKP 12 C5CWK1_VARPS 85.1% 20.9% -----------VRRKGV----YASETFRRHKDAQEW---ALATERRIDLGEPATRSKVKDPTTFGDLIDLHVTDMKEVLR 13 Q9T1R0_BPAPS 79.6% 16.6% ------PCGKRIKESLGTEDKKQAQELHDKRRAELW---RIAKLDD------------FPNVTFDEACLRWIEE-KANKK 14 J7SJD1_MORMO 78.9% 17.4% ------PGGKRIKKSLGTSDKKQAQELHDKLKAEQW---RIEQVGD------------FPDYTYEEACLRWLEE-KADKK 15 G8C7S0_9CAUD 78.9% 16.7% ------PSGKRIRRSLGTGDKKQAQELHDKLKAEAW---RVDKIGE------------LPTRTFEECCIRWLRE-KEHKR 16 A4W7K0_ENT38 78.9% 15.5% ------PSGQRIRRSLGTGDKKQAQELHDKLKSEAW---RVDKIGE------------LATRTFEECCIRWIRE-KDHKR 17 K7P7R5_9CAUD 78.6% 18.1% ------PDGSRVRRSLETSDKRQAQELHDRLKAEAW---RVKNLGE------------SPKKLFKEACIRWLRE-KSDKK 18 A0A0E9M9A6_9PROT 76.2% 16.6% ------PSGERVRCSAGTTDKTQAQELHDKLKAESW---RVDKLGE------------KPAYTWDDAAYKFLME-TTHKA 19 E5AKM7_BURRH 80.2% 18.0% P-----GGGKPLQGSTGTRDKAKAQEFHDRLKASLW---DRVKLGH------------RPHYTWNEAVLEYVAD-REGMA 20 Q45YI6_9CAUD 87.2% 16.8% ------IDGSRIRQSSGTSDRRAAEELAAKVASDYW---RQKKLGE------------RPAVTWDAAVVHWLKQ-NQHQR 21 Q9T1P3_BPD3 80.2% 18.8% ------ATGKLVRRSSGTADYSAAKALEQQERAKAW---KEKEMGV------------NPPRTFEEVIIPYLQHARQHQR 22 16505416 74.2% 17.6% ----NGRDGKRVRKQ-----------FATKGEAIAF---ENHTMDEVNKKPWLGEK--EDRRHLSEVIEQWHSLYGQTLA 23 E5G6L0_9CAUD 73.4% 19.4% ----NGRNGKRVRKQ-----------FATKGEAIAF---ESFTMEEVNKKPWLGEK--EDRRHLSELIEQWYSLYGQTLA 24 E0SAL2_DICD3 79.6% 15.0% ----FGREGKRVRKQ-----------FATKGEALAF---ERFTMEESENKPWLGEK--ADNRSLREIIDLWFSLYGRTLA 25 F1BUS9_9CAUD 75.5% 14.2% ----NGAKGKRIRKK-----------FATKGEALAY---EQHAVQ----LPWNEEQ--TDRRTLKDLITSWYSAHGITLK 26 B2VHB7_ERWT9 74.9% 16.2% ----NGAKGKRIRKK-----------FATKGEALAF---EQFTVQ----NPWQEER--EDRRTLKELVDAWYSAHGITLK 27 A0A0A0Z398_9ENTR 74.7% 16.8% VSRSDGKQGKRVRKK-----------FATKGEALAF---ENYTLQKIEDAPWLGQS--KDKRLLSDLINLWFERHGITLR 28 Q1I119_9CAUD 74.2% 17.6% ------HDGKRVRKW-----------FVTRGEATRFFNQEQAKNATQSENVRVVLS--NDLAPLSHYAHEWYELYGQTLN 29 C5BFY2_EDWI9 76.8% 16.5% ----YGRDGQRIRRQ-----------FTTRGEALAF---ERRMNPR---GVSLDMG--ESATHLSDLILRWYELHGRMLS 30 U5N0A8_9CAUD 71.5% 14.7% ----RGRDGKRIRRK-----------FERKAEAVAF---ERYTIAYASQKEWAGQR--ADRRTLSELLDIWWKYHGQNHE 31 A0A0F7LA05_9CAUD 72.1% 16.0% ----QGADGKRIRRK-----------FKTKGEAQAF---ERHVLVNYHNKEWLEKP--ADRRTLTELLGRWWIYHGKSHE 32 A0A097QXD5_HAFAL 72.3% 16.3% ----QGSEGKRIRRR-----------FNTKGEAQIF---ERHILVNYHNKEWLDKP--ADRRKLTELLNLWWAYHGKNHR 33 VINT_BPP2 73.1% 13.4% ----TGRNGKRIRRK-----------FDKKSEAVAF---EKYTLYNHHNKEWLSKP--TDKRRLSELTQIWWDLKGKHEE 34 A0A090ICP0_9GAMM 71.3% 16.8% ----QGRSGKRYRKK-----------FKTKGEAQQY---ERWLLSTQNQKGWVEKS--ADKRPLLDLIDLWYRYHGQQLK 35 E8TMK0_MESCW 85.6% 17.5% --------------------------FSSQSPKIRY---TYNKIRE------------VKSHRVGDLFSAYRDILWDDGR consensus/100% ...............................................................h.thh..a......... consensus/90% ...........hp.............h.tp.tu..a........................th.htchh..a.t..t..ht consensus/80% ...........lRpp...........htp+.cA.ta...t..h.tt............t.phpht-hh..ahp..t.php consensus/70% ...........lR+p...........FtsKtcA.ta...t.hh.tp............ttptshp-hlttahp.hstphc cov pid 161 . . . 2 . . . . 240 1 16505330 100.0% 100.0% GHQQ--EFYRVRVIQ-----RHPLAEK---MMDEITTVDIASYRDDRLSQ-------------------VNTRTG---RC 2 A0A0F2QU46_9PSED 96.9% 48.6% GYTQ--ESYRIAHIL-----RAPIATK---TMREISSPDIADYRDDRLKQ-------------------LNQRTG---KS 3 A0A0M3LRG1_9CAUD 70.8% 29.8% GKRE--ERYRLLRIA-----GSSLGNI---PLPALTKEHLRQWQNQRLQ------------------------------E 4 Q8XYV1_RALSO 71.3% 28.3% GSRW--EILRLDLIGRKRIEGKPFREI---RLADLRPQHIAAWRDVRAR------------------------------E 5 A0A0A1I5U0_9CAUD 72.1% 30.0% GGAV--EVIRLNAML-----DTKYAQY---RLVNFTKDVVAKWRDERLE------------------------------K 6 B4EEA7_BURCJ 71.8% 29.6% GTAQ--ELSVLKACT-----LVDLAKR---PLAAIRSADLAKLRDEWLK------------------------------D 7 V5UDF2_9BURK 72.1% 30.7% SAAI--ESVKIDVLLR----DKALVEL---KMSAVTSAALAKWRDRRLK------------------------------E 8 W6MYA3_9VIRU 71.5% 37.0% GASQ--ERGRIRRWL-----AHPLAAK---GLGEITPSDLAEYRDSRLK-----------------------------DG 9 J9Z8X1_LEPFM 77.3% 29.0% GSYQ--ESRRIENLK-----IHSLGKR---FLATIQGRDIAEYRDERLA------------------------------T 10 Q88A62_PSESM 77.5% 26.6% PTTQRGETSKAKKL------IEHLGKY---SLAALSADIIAGYRDKRLNE---------------------PSRG---GT 11 A0A0F3IJY5_9GAMM 77.0% 21.4% KQTQ-AQQPQLERW------KSELGSY---LLSDITPALIVECRDKLLSE--------------------TTPHG---NI 12 C5CWK1_VARPS 85.1% 20.9% APRR-SKAFTLDAL------NTKLGKL---KLKDLTRERLIQFGKDRAK-----------------------------EG 13 Q9T1R0_BPAPS 79.6% 16.6% SLDD--DKGRLGFW------LLYFSGT---RLKDMTEAKIYSAISKMKNRQEQLRWKSRVNSAKRKGIEIPAYQA---KE 14 J7SJD1_MORMO 78.9% 17.4% SIED--DKNFIAFW------LEYFEGV---RLKDITENAIYKIISKMTNKHAENCWRRKVDTAKRKGKEVPLFTA---KP 15 G8C7S0_9CAUD 78.9% 16.7% SLDD--DKTKIEYF------LRHFSGR---DISTITADQVHEAVSKMVNRKHIQVWESRRDAAIRRGKEPPPYVE---KP 16 A4W7K0_ENT38 78.9% 15.5% SLDD--DRTKIEYF------LRHFSGR---DVSTITAEQVHDAVSKMVNRKHIQVWESRRDAAIRRGKEPPPYGD---KP 17 K7P7R5_9CAUD 78.6% 18.1% SIDD--DKSIISFW------MLHFRET---ILSDITTEKIMEAVDGMENRRHRLNWEMSRDRCLRLGKPVPEYKP---KL 18 A0A0E9M9A6_9PROT 76.2% 16.6% THKD--DKSRLRWI------QPYLTGK---VLRDIDREMISRIGEIKA------------------------------KQ 19 E5AKM7_BURRH 80.2% 18.0% SIET--TKTHLRWL------DKHLSGV---RLVDIDRERIDAIARIKRQE-----------PRVIRTRYGEQATG---RT 20 Q45YI6_9CAUD 87.2% 16.8% SLET--TKQRLRWL------TDQLKGE---NVRNIDRERIQALIETKAAE---------------------KYRG---SP 21 Q9T1P3_BPD3 80.2% 18.8% SYET--TVHRIKPL------REYFAGR---VVNDLGGQDIRGYGAHRLD-----------------------------AG 22 16505416 74.2% 17.6% DPKR--LLAKLSII------CNGLGDP---IASELTAGDFTKYREARLKG------------------EVKNEDGVLMSP 23 E5G6L0_9CAUD 73.4% 19.4% DPKR--LMAKLRII------CNGLGDP---IASELTAGDFTKYREARLKG------------------EVRNEDGTLMSP 24 E0SAL2_DICD3 79.6% 15.0% DPKR--MMAKLDII------CTGLGNP---KARELSAADFAHYRELRLAG------------------QMTDSSGIPLAV 25 F1BUS9_9CAUD 75.5% 14.2% DGEK--RQLAMLHA------FECMGEP---LAVDFDAQMFSRYRERRLKG------------------DFARSSRV--KE 26 B2VHB7_ERWT9 74.9% 16.2% DGIR--RQQAMHHA------FGCMGEP---LARDFDAQMFSRYRERRLKG------------------EYARSNRV--KE 27 A0A0A0Z398_9ENTR 74.7% 16.8% DGEK--RKSTMLWA------SDCMGAP---LATEFTAQLFTAYRAKRLDG------------------HFARTKRV--TK 28 Q1I119_9CAUD 74.2% 17.6% DGQA--RLNKLLNL------CSHLGDP---PANKFTTQDFAEYRKKRLAG------------------KFSADPK---RP 29 C5BFY2_EDWI9 76.8% 16.5% SGAG--RKGKLDAI------CRRLGDP---LAGDFDKGMFARYRERRLNG------------------EWNPKGK---KR 30 U5N0A8_9CAUD 71.5% 14.7% HGTK--EFNHLLKT------ISGIGDI---PVSRMSKRALMDYRSMRLR-----------------------------DG 31 A0A0F7LA05_9CAUD 72.1% 16.0% RGNI--ERGRLTTI------IAKFAEMGVSRADQLTKKTITDYRVVMMN-----------------------------DG 32 A0A097QXD5_HAFAL 72.3% 16.3% RGEK--ERERLTNI------IGNLSEMDVTRADQLTRKAIMNYRVVMLD-----------------------------RG 33 VINT_BPP2 73.1% 13.4% HGKS--NLGKIEIF------TKITNDP---CAFQITKSLISQYCATRRS-----------------------------QG 34 A0A090ICP0_9GAMM 71.3% 16.8% RPEK--ELKHLLSI------DKDLGHP---RADQVTKQRVMQFRADKMA-----------------------------IG 35 E8TMK0_MESCW 85.6% 17.5% HKYN--VSSFIGEI------DEILLGE---RFSAFDQSTLDNLIGTLRQ-----------------------------RG consensus/100% ..........h..h.........h.t.....h.tht...h.th...h................................. consensus/90% t.t......hh..h.........htt.....h.thstt.h.thht.hht............................... consensus/80% s.pp..ph.plthh.......t.hst.....htphstt.hhphtpthhp.............................t. consensus/70% shpp..cht+lphh......hpthut....hhsplstptltphtpp+hp.............................pt cov pid 241 : . . . . 3 . . 320 1 16505330 100.0% 100.0% ISGNTVRLELALLSSLYNLASVEWGT-CRTNPVEMVRKPK----------ISGGRDRRLTSQEERRLSRY---------- 2 A0A0F2QU46_9PSED 96.9% 48.6% ISPATVRLEMSLLSNVFDIGRIEWGT-CDSNPVANVRKPK----------SPPGRDRRLLPREERLILRY---------- 3 A0A0M3LRG1_9CAUD 70.8% 29.8% VKPVSVSRERATLSALFTKA-MEWDY-LKENPLKTLEKIK----------TPPARTRRYSDEEIDKLIFVSGYSPSQPP- 4 Q8XYV1_RALSO 71.3% 28.3% VAGSSVSREMSLLSHALEVARKEWGW-LVTDPMKDVRRPP----------DNPPRQRLVSDNEIERITLALGYQEGKPV- 5 A0A0A1I5U0_9CAUD 72.1% 30.0% VSGSTVNREMNLLGHVIEKARKEWGVELPENPVQEVERPK----------HSPHRERRLRDDEEARLLFA---------- 6 B4EEA7_BURCJ 71.8% 29.6% YKPATVLRRLAVLSHVFNIARKEWGMENLSNPVELVRKPQ----------PNNARTRRITDAEPIVDALAQGESDRRARQ 7 V5UDF2_9BURK 72.1% 30.7% VTGATVNREIDVLSTALNHARREWGI-HVENPVPYIKRPE----------KARSRDRRLAPDEERYLMAALTGGERRED- 8 W6MYA3_9VIRU 71.5% 37.0% ASSSTVRLDLAIISHLYTIAAKEWRLEGLTNPCKNLRMPK----------GSRARERRPTTIELRKIYAE---------- 9 J9Z8X1_LEPFM 77.3% 29.0% VSPATVRRELVILSHLFTVASKEWGMSGLGNPVQAIRLPS---------GRGVSRDRRLNPGEETALLDA---------- 10 Q88A62_PSESM 77.5% 26.6% ISNNTVRLELALLSHLYTVAIQEWGLGLTFNPVLNIRKPS----------PGDGRDRRLSPEEERLLLAA---------- 11 A0A0F3IJY5_9GAMM 77.0% 21.4% RSPATVVRYMAALSHAFTIAVNEWQW-LEDSPMRKVKKPK----------EPKGRVRWLDDGERSKLLIA---------- 12 C5CWK1_VARPS 85.1% 20.9% AGPVTISMDIGYIKLVVSHAAAVHGV---RVPVEPIDLARIALKRLGLVGKGRERDRRPTLDELQALADYFA-------- 13 Q9T1R0_BPAPS 79.6% 16.6% VSIATKAKHLALLKSMMKSAERDWKW-IEKSPV--IKVPS----------AREKRIRWLEPDEAERLINE---------- 14 J7SJD1_MORMO 78.9% 17.4% VTTATKARYLSFIKALLRAAEREWKW-IEKSPV--IKIPS----------IRDRRVRWLEPVEAKRLIDE---------- 15 G8C7S0_9CAUD 78.9% 16.7% VSQATKSQHLSFMRSLFKAAANDWGW-IKTAPV--IKTKK----------PISKRIRWLTRDEAERLISC---------- 16 A4W7K0_ENT38 78.9% 15.5% VSQATKSQHLSFMRSLLKAAADDWGW-IKSAPA--IKTRK----------PVSKRIRWLTRDEAERLIEC---------- 17 K7P7R5_9CAUD 78.6% 18.1% ASKGTKTRHLAILRAILNMA-VEWGW-LDRAPK--ISTPR----------VKNGRIRWLTEEESKRLFAE---------- 18 A0A0E9M9A6_9PROT 76.2% 16.6% SSPATANRILALIRSIIRRAALEWEW-IEKVPR--IRLYK----------EAKRRVRWLTPEQVKTLLVE---------- 19 E5AKM7_BURRH 80.2% 18.0% VSEGTVRRVIGVLVAVLNAA-VERGW-LDRAPV--RKPVK----------LVSKRIRWLTAAEADRLLAE---------- 20 Q45YI6_9CAUD 87.2% 16.8% VAGATVNRHMAALSVILHHCHAE-GW-IDAVPP--IRKLR----------ENSARLTWLTRAQAQRLLEE---------- 21 Q9T1P3_BPD3 80.2% 18.8% ASPATINRELAALSAAINHCNTELEW-ALPNPVKG-RKMR----------EAEGRDRWLTRAEVEALCRA---------- 22 16505416 74.2% 17.6% VKPRTVNLEQRNLSSVFGTLKKLGHW-PAPNPLAGLPTFK----------IAEGELAFLAPEEIKRLLDA---------- 23 E5G6L0_9CAUD 73.4% 19.4% VKPRTVNLEQRNLSSVFGTLKKLGHW-SAPNPLAGLPTFK----------ITEGELAFLSVDEIKRLLAA---------- 24 E0SAL2_DICD3 79.6% 15.0% VKPRTVNLEQRNLSAVFGTLKKLGHW-DAPNPLSGLPTFK----------IAQQELAFLAPNEIKRVLDA---------- 25 F1BUS9_9CAUD 75.5% 14.2% VSPRTLNLELAYFRAVFNELGRLGEW-KGENPLRHIRPFR----------TEESEMAWLTHSQIAHLLAE---------- 26 B2VHB7_ERWT9 74.9% 16.2% VSPRTLNLELAYFRAVFNELNRLGEW-KGENPLKNMRPFR----------TAEMEMAWLTHDQIALLLDE---------- 27 A0A0A0Z398_9ENTR 74.7% 16.8% VSPRTMNLEHAYFLAVFNELKRLGEW-EAPNPLENVRQFR----------TEESEMAYLTGEQIDRLLKE---------- 28 Q1I119_9CAUD 74.2% 17.6% PKQSTVNREHAYLRAVFNELKSLGKW-SGDNPLSEISLFK----------ENETELAFLFGDEIRRLIDE---------- 29 C5BFY2_EDWI9 76.8% 16.5% LQEATVNREQAYLHAVFAELRRLGEW-EGGNPLDGIRQFR----------EGDQELAFLYADEITRLLAA---------- 30 U5N0A8_9CAUD 71.5% 14.7% ISAATINRDMYRLSGMFTKLIQLDEF-SGQHPIHGLPPLA----------EANPEMTFLEKAEIEKLLNV---------- 31 A0A0F7LA05_9CAUD 72.1% 16.0% LKPASVNRHLAIMSGMFTKLIDAGEY-HSHNPFREVKRLR----------EAVTEMAFLSSEEITRLLSM---------- 32 A0A097QXD5_HAFAL 72.3% 16.3% LKPSSVNRQCAIMSGMFTKLINAEEY-QNTNPFHEVKPFK----------EAETDMSFLSADEVALLISR---------- 33 VINT_BPP2 73.1% 13.4% IKPSSINRDLTCISGMFTALIEAELF-FGEHPIRGTKRLK----------EEKPETGYLTQEEIALLLAA---------- 34 A0A090ICP0_9GAMM 71.3% 16.8% NKATTINRSQVRLSGVFTVLIKAGEF-HNEHPLKGIGKLK----------IRATEMGFLNKKEIIQLLDN---------- 35 E8TMK0_MESCW 85.6% 17.5% NSNATINRKMAALSKLLRKAHKMGDI----HSLPEFRRQK----------ERAGRIRFLERDEEARLFAA---------- consensus/100% .t..oh......h..hht.h.....h.....s......................c.th....p................. consensus/90% .p.tohth..thhpthht.h....th....tPh..h...p..............c.thlt.tp.thlh............ consensus/80% hpssTlshchshlpthhphh.t.hth...tsPh..lch.c...........tttc.thLp.tE.ttLhtt.......... consensus/70% lpssTlshchuhlpslhsthtp.hta..tpsPl..l+h.+...........sptchthLs.pEhppLltt.......... cov pid 321 . . : . . . . 4 400 1 16505330 100.0% 100.0% ------FQ--EQNPALHAIFHLAIETAMRQGEILSLRWEHIDLQHGVAHLPM---------TKNGSSRDVPLSR----KA 2 A0A0F2QU46_9PSED 96.9% 48.6% ------CH-GHQTQELYSIVILALETAMRQGEILKLEWEHTNLRNRIAHLPE---------TKNGSKRDVPLSI----KA 3 A0A0M3LRG1_9CAUD 70.8% 29.8% ----LLMQ-----QRAGAALLFAIETAMRAGEIAGLKWEHINLQARTAFLPQ---------TKNGYSRTVPLST----KA 4 Q8XYV1_RALSO 71.3% 28.3% ---------ALPSQRIAVAFLLAIETAMRSGEILGLTSSTVDYNRRVAHLPL---------TKNGGARDVPLST----RA 5 A0A0A1I5U0_9CAUD 72.1% 30.0% ------AE-KARNKYLRPLIVLALETAMRRAELVNLQWEFIDIPKRRIHLIEGGGVNGDFSIKNGSSRVVPLSK----RA 6 B4EEA7_BURCJ 71.8% 29.6% GELECLVA-ASESTFLPSIVWLAVETAMRRGEIVNLRWEHVDLKRRVAHLPV---------TKNGSARDVPLSP----RA 7 V5UDF2_9BURK 72.1% 30.7% ---GTFSK-GARNPWLLPLVELALETAMRRGELLSLRWENVDLERRTAYLPD---------TKNGDARTVPLST----RA 8 W6MYA3_9VIRU 71.5% 37.0% -------A-AKLHPELPVIIELAADTAMRRSELLLLRREQI--RDKVAVLED---------TKNGERRSVPLSS----RA 9 J9Z8X1_LEPFM 77.3% 29.0% ------CE--KYGGDLPHVVLLALETAMRRGEIAGMTWDDVDLKKRTVTLPE---------TKTGEVRIVSLSS----EA 10 Q88A62_PSESM 77.5% 26.6% ------VN-RHSNPMLGWIVCIALETGMRSSEISSLRRPQVDLAKRVIRLSD---------TKNDGSRTVPLSK----RA 11 A0A0F3IJY5_9GAMM 77.0% 21.4% ------CK-ESSNRWLYLCVILALSTGMRQGELMGLQWQDVNLKDGFLILHE---------TKNGERRRVPLTG----HA 12 C5CWK1_VARPS 85.1% 20.9% ------SN-SRQIIPLGRIMRFAVATAMRQDEICRIRWEDIDAKTRTVIVRDRK----DPRDKNGNDQKVPLLDVTGFDA 13 Q9T1R0_BPAPS 79.6% 16.6% ------CP-----EPLRSTVEFALATGLRRSNIINLAWSQIDMQRKVAWIEPEN-------SKSGKAIGVALND----TA 14 J7SJD1_MORMO 78.9% 17.4% ------CP-----EPLKSVVRFALSTGLRRSNILNLGWQQIDMQRKVAWIYPED-------SKSGKAIGVALND----TA 15 G8C7S0_9CAUD 78.9% 16.7% ------MP-----ESIKPVVIFALATGLRRSNIIDLEWQQVDMQRKVAWVNPEN-------AKAGKAIGVALND----TA 16 A4W7K0_ENT38 78.9% 15.5% ------MP-----ESIKPVVIFALATGLRRSNIVDLEWQQVDMQRKVAWVNPEN-------AKAGKAIGVALND----TA 17 K7P7R5_9CAUD 78.6% 18.1% ------IA-----PHFFPVVMFAITTGLRRSNVTDLEWSQVDLDKKMAWMHPDE-------TKAGNAIGVPLNE----TA 18 A0A0E9M9A6_9PROT 76.2% 16.6% ------LP-----PHQQDMVLFALSTGLRQSNVVQLEWSQVDMNRRVAWIHPDQ-------AKARKAILVPLNS----VA 19 E5AKM7_BURRH 80.2% 18.0% ------LP-----EHLADMAQFSLETGLRRANVTGLQWPQIDLVRRVAWIHPDQ-------AKARKAITVPLSD----TA 20 Q45YI6_9CAUD 87.2% 16.8% ------LP-----THLRQMARFALATGLRESNVRLLEWAQVDRERALAWIHADQ-------AKAGKVISVPLNE----DA 21 Q9T1P3_BPD3 80.2% 18.8% ------ARGQKFGPMLEDFIRLAVNTGCRREEMLGLEWRRVDFANRLIYLEASH-------TKAGKRRSIPINE----GA 22 16505416 74.2% 17.6% ------CA-DSQSPSLLMIAKICLATGARWSEAENLQGHQL-SKYRITYTK----------TKGKKNRTVPISQ----EL 23 E5G6L0_9CAUD 73.4% 19.4% ------CA-ESQSPSLLMIAKICLATGARWSEAENLQGHQI-SKYRITYTK----------TKGKKNRTVPISQ----DL 24 E0SAL2_DICD3 79.6% 15.0% ------CA-ESANPHLLLVTKICLATGARWSEAEGLSGQQV-TPYRITYTR----------TKGKKNRTVPISR----EL 25 F1BUS9_9CAUD 75.5% 14.2% ------CR-NSDQADLETVVKICLATGARWSEAEGLKKSQI-SKYKITYIK----------TKGRKNRTVPITE----SI 26 B2VHB7_ERWT9 74.9% 16.2% ------CK-RHDHPDLETVVRICLATGARWSEAESLKKSHL-AKYKITYTN----------TKGRKNRTVPISK----EL 27 A0A0A0Z398_9ENTR 74.7% 16.8% ------CR-SSSAKDLEIIVRVCLSTGARWGEAEKLKRSQI-SAGKITFIK----------TKGKRNRTIPLDA----DL 28 Q1I119_9CAUD 74.2% 17.6% ------CD-NSRNKDLGLITRICLATGARWSEAEQLKQAQV-IPYKITYIN----------TKSGKNRTIPISP----EL 29 C5BFY2_EDWI9 76.8% 16.5% ------CD-ASSKADLGGIVRVCLATGARWSEVQSLRQSQV-LPGRLTFTH----------TKSKKNRTVPISE----RL 30 U5N0A8_9CAUD 71.5% 14.7% ------LD-----GDDLLVALLCLSTGGRWTEVATLKPAQI-TNCRVTFLK----------TKNGKKRTVPISE----EL 31 A0A0F7LA05_9CAUD 72.1% 16.0% ------LD-----GDELNATLVCLSTGGRWSEVSNLKAEHI-INQMVTFMK----------TKNGKRRTIPVSQ----DL 32 A0A097QXD5_HAFAL 72.3% 16.3% ------LD-----GDDLKAALLCLATGGRWDEVASLKGEHV-IGGRVIFMK----------TKNGKRRAVPINN----DL 33 VINT_BPP2 73.1% 13.4% ------LD-----GDNKKIAILCLSTGARWGEAARLKAENI-IHNRVTFVK----------TKTNKPRTVPISE----AV 34 A0A090ICP0_9GAMM 71.3% 16.8% ------LD-----GDELNIAKLCLSTGARWSEAAELRGNDI-IHGRVTFND----------TKNGKNRTVPITS----EL 35 E8TMK0_MESCW 85.6% 17.5% ------IK--SRSEDAYRLSVFLVDTGCRLGEALGLIWNDIQEHRVSFWI-----------TKSGRSRTIPMTE----RV consensus/100% ..................h..h.htTuhR.tph..h....h....h.hh.............Kst....lsh.......h consensus/90% ..................hh.hsltTuhR.sph.tLp.tpl....thhhh...........sKstpthtlslst....ph consensus/80% ......h........h..hshhsltTuhR.uph.tLphppl.htt+hsah...........oKstpshsVPlsp....ph consensus/70% ......ht......plh.lshhsLsTGhRhuEhhsLphppl.hpt+lsalp..........TKsscsRsVPlsp....ch cov pid 401 . . . . : . . . 480 1 16505330 100.0% 100.0% RHLLQGMTVA-----------------LSGNVF-HYS-----------------SSGFKSAWRVALQRLNI--------- 2 A0A0F2QU46_9PSED 96.9% 48.6% RDALIRLGVK-----------------TKGRVF-NYT-----------------SNGLKSAWRIMMLRLEI--------- 3 A0A0M3LRG1_9CAUD 70.8% 29.8% IAILNQLAQL--EPN------------KQNSVF-QLT-----------------SRSLDSNFRKLKQKANLHN------- 4 Q8XYV1_RALSO 71.3% 28.3% VELLRMLPAV-----------------EVGDPLLGLS-----------------AASRDALFRKAKEKAGI--------- 5 A0A0A1I5U0_9CAUD 72.1% 30.0% IDALEAYQPDP----AK----------RKGQVFEELT-----------------EEAVTQAFTRTVARAKM--------- 6 B4EEA7_BURCJ 71.8% 29.6% VAVLQALKDA--RDGTGSKTTGATDDADVGRVF-EIR-----------------GDAVTRAFERAVVRARTNYLDACREA 7 V5UDF2_9BURK 72.1% 30.7% THILKALPSYI-ADKTGER--------AVGPVF-AIT-----------------AMALRKGFARAIERAQQQYAADCEEA 8 W6MYA3_9VIRU 71.5% 37.0% RELLKSLPAR-----------------IDGKVF-SLA-----------------PNTVSNYFPKVCEAAGV--------- 9 J9Z8X1_LEPFM 77.3% 29.0% IRILSSIPRR-----------------IDGRVF-GYTD----------------PHSITWAFIHACKKAGI--------- 10 Q88A62_PSESM 77.5% 26.6% TEVFKAAMDNPVRPI------------DCNLVF----------FGEPGKDGKRRPYTFTKIWGQLKKKLDL--------- 11 A0A0F3IJY5_9GAMM 77.0% 21.4% LMLLREHAKV--RRL------------DTSLLF-PSKSDP------------AKPIDLTKPWRNALKLAEI--------- 12 C5CWK1_VARPS 85.1% 20.9% WAILEEQKPFS---------------GNSSLVF-PYN-----------------GRSVGTAFRRACKELKI--------- 13 Q9T1R0_BPAPS 79.6% 16.6% CCILTRQLGN-----------------HQKWVF-VHTMSAKRSDGSQTNSIRKMRVDSNTAWRAALKRAGI--------- 14 J7SJD1_MORMO 78.9% 17.4% CRVLRSQIGR-----------------HHKWVF-VHTEPSYRNDGTPVAAVRKMRTDSNTAWRAALKRAGI--------- 15 G8C7S0_9CAUD 78.9% 16.7% CRVLRDQIGK-----------------SSRWVF-VHTKPSTRPDKTVTPAVRKMRVDDNVAWRIGLERAGI--------- 16 A4W7K0_ENT38 78.9% 15.5% CRVLRNQIGK-----------------SKVWVF-AHTKAATRPDGTLTPAVRKMRIDDNTAWKIGLEKAGI--------- 17 K7P7R5_9CAUD 78.6% 18.1% CQILRKQQGL-----------------HKRWVF-VHTKPAYRSDGTKTAAVRKMRTDSNKAWKGALKRAGI--------- 18 A0A0E9M9A6_9PROT 76.2% 16.6% MGVLTRQVGK-----------------HPERVF-TYHGKP----------V---AWANTKAWTGALKRAGI--------- 19 E5AKM7_BURRH 80.2% 18.0% VAVLQRQLPKK-RKV-----------EHVESVF-VYQGAP----------V---RQTATAAWKKALKRAGI--------- 20 Q45YI6_9CAUD 87.2% 16.8% LGVLREQQGQ-----------------HKRYVF-VYKGAP----------I---GRIYNHAWQKACVRAGL--------- 21 Q9T1P3_BPD3 80.2% 18.8% MAALKRRMAF--RSETS---------PECPWVF-ARANGDR-------------VISLSAGFKQACQAAKI--------- 22 16505416 74.2% 17.6% YDELPK---------------------NRGKLF----------------------TPCRKSFERAVKRAGIELP------ 23 E5G6L0_9CAUD 73.4% 19.4% YHELPK---------------------NRGKLF----------------------TPCRKSFERAVKRAGIDLP------ 24 E0SAL2_DICD3 79.6% 15.0% YDEIPR---------------------KSGKLF----------------------SPCRKAFERAINRTGIQLP------ 25 F1BUS9_9CAUD 75.5% 14.2% YRIIPEN--------------------KTGRLF----------------------ADCYGAFRSALERTGIELP------ 26 B2VHB7_ERWT9 74.9% 16.2% YESLPDD--------------------KKGRLF----------------------SDCYGAFRSALERTGIELP------ 27 A0A0A0Z398_9ENTR 74.7% 16.8% IAELPK---------------------KNGALF----------------------TPCYYAFRTALEKSEIDLP------ 28 Q1I119_9CAUD 74.2% 17.6% YNMLPQ---------------------RRGRLF----------------------GDAYEAFENAVDRAGIDLP------ 29 C5BFY2_EDWI9 76.8% 16.5% QALLPT---------------------KQGRLF----------------------TPCYEAFKAALARAGLHLP------ 30 U5N0A8_9CAUD 71.5% 14.7% EKKVKEE--------------------ASAKLF----------------------KVDYEKFCGILRRVKPDIP------ 31 A0A0F7LA05_9CAUD 72.1% 16.0% IKRIKTK--------------------NSGRLF----------------------NASYYKVRNALREVKPDLP------ 32 A0A097QXD5_HAFAL 72.3% 16.3% ESEIKTK--------------------ATGRLF----------------------YPNYMRARNILKEIKPDLP------ 33 VINT_BPP2 73.1% 13.4% AKMIADN--------------------KRGFLF---------------------PDADYPRFRRTMKAIKPDLP------ 34 A0A090ICP0_9GAMM 71.3% 16.8% MNDIYKG--------------------KTGRLF----------------------NGSYMEFYDVLKAQGFDLP------ 35 E8TMK0_MESCW 85.6% 17.5% KEVIKLPPTEGRR--------------PKGPFT-KLS-----------------QAQFRAIWNDAKAEVGLGAD------ consensus/100% ...h............................h............................h..hh...t.......... consensus/90% ht.l.t.......................t.lF.......................s....at.hhttht.......... consensus/80% hthl.p.....................ppshlF.......................s..ttaptshpcsth......... consensus/70% hphLtp.....................ppshlF......................ts.ttsacpuhc+stl......... cov pid 481 . 5 . . . . : . 560 1 16505330 100.0% 100.0% ---------VDLHFHDLRHEAISRLFELGTLNVMEVAAISGHRSLNMLKR-YTHLRAYQLVSKLDARRRQTQKIA-PYFV 2 A0A0F2QU46_9PSED 96.9% 48.6% ---------EDLHFHDLRHEACTRLFELGTLDVMEIAAISGHKSLAMLKR-YTHLQASKLVKKLEGNKHRGQQVVINHLV 3 A0A0M3LRG1_9CAUD 70.8% 29.8% ---------ADLHFHDTRREALTRLSKY--LTVMELAKVSGHRDLSILQNTYYNPDISELVSKLQ--------------- 4 Q8XYV1_RALSO 71.3% 28.3% ---------ADLTFHDTRHEAITRLAKK--LQPLDLARMTGHTNLQELMT-YYNESAENIAQRLG--------------- 5 A0A0A1I5U0_9CAUD 72.1% 30.0% ---------ENFHLHDLRHEATSRFFEKG-LSIAEVKSITGHKSMSALER-YVHINAGGLAAKLD--------------- 6 B4EEA7_BURCJ 71.8% 29.6% GQRPDRTFLTDLRFHDLRHEATSRLASI--FPMHELTKITGHKDPRMLMR-YYHPRAEDLAKRLI--------------- 7 V5UDF2_9BURK 72.1% 30.7% GRVPLPGFLSDLHFHDTRHEAASRLADKL-SNVLELSAVTGHRDLRMLKR-YYHPRAEDLAKKLD--------------- 8 W6MYA3_9VIRU 71.5% 37.0% ---------SGLTFHDLRHEATSRLFERG-FSMMEVAAITGHKTLAMLKR-YTHLSPHALADKLG--------------- 9 J9Z8X1_LEPFM 77.3% 29.0% ---------NGLTFHDLRHEATSRLFELG-LSAEKVKKITGHKTYQMLAR-YTHLKAEDIAEEIDKLKK----------- 10 Q88A62_PSESM 77.5% 26.6% ---------PDFRFHDLRHEAVSRLVEGG-LSDQEVSAISGHKSMQMLKR-YTHLRAEDLVARLDRIGS----------- 11 A0A0F3IJY5_9GAMM 77.0% 21.4% ---------NDFHWHDLRHCTASYLAMNG-ASLAEIAEVLGHKTLNMVKR-YAHLSDGHVSNVVASMNA----------- 12 C5CWK1_VARPS 85.1% 20.9% ---------KDLKFHDLRHEAASRLFEAG-FTIEQAALVTGHKDWKMLKR-YTHLRPEHLRGVRP-----------KHIP 13 Q9T1R0_BPAPS 79.6% 16.6% ---------ENFRFHDLRHTWASWLIQSG-VPLSVLQEMGGWESVEMVRR-YAHLASNHLTEHAKQIDGVFDR------- 14 J7SJD1_MORMO 78.9% 17.4% ---------DDFRFHDLRHTWASWLIQSG-VPLSVLQEMGGWESIEMVRR-YAHLAPNHLTEHAKQIDAIFD-------- 15 G8C7S0_9CAUD 78.9% 16.7% ---------EDFRFHDLRHTWASWLIQSG-VPLSVLQEMGGWESIEMVRR-YAHLAPNHLSEHARKIDAIFG-------- 16 A4W7K0_ENT38 78.9% 15.5% ---------EDFRFHDLRHTWASWLIQSG-VPLSVLQEMGGWESIEMVRR-YAHLAPNHLTEHARKIDAIFG-------- 17 K7P7R5_9CAUD 78.6% 18.1% ---------SNFRFHDLRHTWASWLVQSG-VSLLALKEMGGWETLEMVQR-YAHLSAGHLTEHASKIDAIIS-------- 18 A0A0E9M9A6_9PROT 76.2% 16.6% ---------ENFRWHDLRHTWASWLAQQG-TPLNVLQELGGWESESMVRR-YAHLSQPVLIEHSELAATMLN-------- 19 E5AKM7_BURRH 80.2% 18.0% ---------RDFRWHDLRHTWASWHVQRG-TPLQVLKELGGWQTLEMVQR-YAHLSADHLMQWVTPLTKLHDE------- 20 Q45YI6_9CAUD 87.2% 16.8% ---------SGLRFHDLRHTWASWHVQAG-TPLPILQQLGGWASYQMVLR-YAHLGRDHVAAYADNIGTLRHKSG----- 21 Q9T1P3_BPD3 80.2% 18.8% ---------ADFTIHDLRHTCAAWLVSAG-VPLADVRDLLGHSTVAMTER-YAHLAPARVRDAVGVLDQVRE-------- 22 16505416 74.2% 17.6% ---------EGQCTHVLRHTFASHFMMNG-GNILVLRDILGHADIKMTMV-YAHFAPDHLEDAVT-KNPLHNLNW----- 23 E5G6L0_9CAUD 73.4% 19.4% ---------EGQCTHVLRHTFASHFMMNG-GNILVLRDILGHSDIKMTMV-YAHFAPEHLEDAVT-KNPLFNLK------ 24 E0SAL2_DICD3 79.6% 15.0% ---------DGQCTHVLRHTFASHFMMNG-GNILVLRDILGHADIKMTMI-YAHFAPDHLEDAIT-KNPLNGLNW----- 25 F1BUS9_9CAUD 75.5% 14.2% ---------AGQLTHVLRHTFASHFMMNG-GNLLVLQRVLGHTDIKMTMR-YAHFAPDHLEEAAK-LNPLAQSGD----- 26 B2VHB7_ERWT9 74.9% 16.2% ---------AGQLTHVLRHTFASHFMMNG-GNILVLQRVLGHTDIKMTMR-YAHFAPDHLEDAVR-LNPLNHQLN----- 27 A0A0A0Z398_9ENTR 74.7% 16.8% ---------AGQLTHVLRHTFASHFMMNG-GNILVLQKILGHTDIKMTMR-YAHFAPNHLEEALK-LNPLKCRKS----- 28 Q1I119_9CAUD 74.2% 17.6% ---------KGQLTHVLRHTFASHFMMNG-GNILVLKEILGHSTIEMTMK-YAHFAPSHLESAVS-LNPLTNPSK----- 29 C5BFY2_EDWI9 76.8% 16.5% ---------KGQRTHVLRHTFASHFMMQG-GNILVLQQILGHSTITMTMR-YAHFAPDHLDAALA-LNPFDNLDT----- 30 U5N0A8_9CAUD 71.5% 14.7% ---------PNQATHILRHTFASHFMMNG-GNIIALQQILGHASIQQTMA-YAHLAPDYLQNAVA-LNPLKGGVT----- 31 A0A0F7LA05_9CAUD 72.1% 16.0% ---------DGQAVHVLRHTFATHFIMNG-GNIITLQRILGHSNIQQTMT-YAHFAPDFLQDAVT-LNPVSGMSI----- 32 A0A097QXD5_HAFAL 72.3% 16.3% ---------RGQALHVLRHTFATHFMMNG-GNIITLQRILGHATIQQTMV-YAHFAPEYLQDAIR-FNPLAGMSI----- 33 VINT_BPP2 73.1% 13.4% ---------MGQATHALRHSFATHFMING-GSIITLQRILGHTRIEQTMV-YAHFAPEYLQDAIS-LNPLRGGTE----- 34 A0A090ICP0_9GAMM 71.3% 16.8% ---------KGQATHVLRHTFASHFMMNG-GNILTLQKILGHSTIMQTMT-YAHLAPDYLNEAMA-LNPMSTIYA----- 35 E8TMK0_MESCW 85.6% 17.5% ---------DQVVPHILRHTCASRLVQGG-IDIRRVQMWLGHQTLSMTMR-YAHLATNDLDGCVIVLETPRSTQPGGNCA consensus/100% ..........t.h.H.hR+phhshh..........ht.h.Gatp...h...Yhp.t...l.t.................. consensus/90% ..........s.hhHsLRHphsohhh..h.hsh..ltth.Gatsht.h.h.YhH.tst.l.thht............... consensus/80% .........ts.thHsLRHphsShhh.tG.hsl..lpplhGapslphhhp.YsHhssptLtptht..t............ consensus/70% .........ps.phHsLRHphAS+hh.pG.hslh.LpplhGHpslpMhh+.YsHhuspcLtptlp.hp...t........ cov pid 561 . . . 6 . . . . 640 1 16505330 100.0% 100.0% PYPACIESVNEGSDGC-----CGFRVHLPDFDNLSVSAASRESALEAAGVLLLRTLAKAAQRGERVPRPGDLPEGKHER- 2 A0A0F2QU46_9PSED 96.9% 48.6% PYPAIAQQTP-----------SGVLVRVLDFEGVQGQGQTSEIALQSAQDALLRHLMVALRDKRPIPAPDQYLETVNEAD 3 A0A0M3LRG1_9CAUD 70.8% 29.8% -------------------------------------------------------------------------------- 4 Q8XYV1_RALSO 71.3% 28.3% -------------------------------------------------------------------------------- 5 A0A0A1I5U0_9CAUD 72.1% 30.0% -------------------------------------------------------------------------------- 6 B4EEA7_BURCJ 71.8% 29.6% -------------------------------------------------------------------------------- 7 V5UDF2_9BURK 72.1% 30.7% -------------------------------------------------------------------------------- 8 W6MYA3_9VIRU 71.5% 37.0% -------------------------------------------------------------------------------- 9 J9Z8X1_LEPFM 77.3% 29.0% ----------------------------------EKSGKTVEAQTKSSGH------------------------------ 10 Q88A62_PSESM 77.5% 26.6% -------------------------------------APQTQGRNRSKSEKK---------------------------- 11 A0A0F3IJY5_9GAMM 77.0% 21.4% ---------------------------------------------------------------KIFGGCDGY-------- 12 C5CWK1_VARPS 85.1% 20.9% P------SLDLPTGPTPADIALGA-WNNPERR--APQPNSAHPSQVAKPHHEHEALGLSASI------------------ 13 Q9T1R0_BPAPS 79.6% 16.6% ----------------------------FNRKISNHVPNLSHLKILKS-------------------------------- 14 J7SJD1_MORMO 78.9% 17.4% ----------------------------------SYVPNTSQGEKLASGDNR---------------------------- 15 G8C7S0_9CAUD 78.9% 16.7% ----------------------------------NHDTNTTQGENQAGLKLA---------------------------- 16 A4W7K0_ENT38 78.9% 15.5% ----------------------------------NHDTDMTQGENQAGLKLA---------------------------- 17 K7P7R5_9CAUD 78.6% 18.1% ----------------------------------RNGTNTAQEENVVYLNAR---------------------------- 18 A0A0E9M9A6_9PROT 76.2% 16.6% ------------------------------------GTNMAQLEEKKVSDNS---------------------------- 19 E5AKM7_BURRH 80.2% 18.0% ----------------------------PTGTTGPIEPTIATWQSMPASST----------------------------- 20 Q45YI6_9CAUD 87.2% 16.8% -TPPEIEKGSDCSEPLSNLVAWGG-IEPPTRGFSKRTADTSAPSGKASRPPKKRKAA----------------------- 21 Q9T1P3_BPD3 80.2% 18.8% ----------------------------------GRISRSVHADNPAHLHGGPLKLVNT--------------------- 22 16505416 74.2% 17.6% ------------KR------------------------------------------------------------------ 23 E5G6L0_9CAUD 73.4% 19.4% -------------------------------------------------------------------------------- 24 E0SAL2_DICD3 79.6% 15.0% ------------SPKN--------------------GGRVAAANGNHSFSSPLTT------------------------- 25 F1BUS9_9CAUD 75.5% 14.2% ------------EMAIEMANV-------------GN-------------------------------------------- 26 B2VHB7_ERWT9 74.9% 16.2% ------------NYTTAIN------------------------------------------------------------- 27 A0A0A0Z398_9ENTR 74.7% 16.8% ------------VAAT---------------------------------------------------------------- 28 Q1I119_9CAUD 74.2% 17.6% ------------KR------------------------------------------------------------------ 29 C5BFY2_EDWI9 76.8% 16.5% ------------LKKC--------------------GGKNGSRI------------------------------------ 30 U5N0A8_9CAUD 71.5% 14.7% -----------------------L-------------------------------------------------------- 31 A0A0F7LA05_9CAUD 72.1% 16.0% ------------MRP----------------------------------------------------------------- 32 A0A097QXD5_HAFAL 72.3% 16.3% ------------NCPPSSPK------------------------------------------------------------ 33 VINT_BPP2 73.1% 13.4% ------------AESVHTVSTVE--------------------------------------------------------- 34 A0A090ICP0_9GAMM 71.3% 16.8% -------------------------------------------------------------------------------- 35 E8TMK0_MESCW 85.6% 17.5% EGPMFSSPVTTPSSPT---------AERKKRDGAAAAAKESPKATRKSSKAK---------------------------- consensus/100% ................................................................................ consensus/90% ................................................................................ consensus/80% ................................................................................ consensus/70% ................................................................................ cov pid 641 : . ] 663 1 16505330 100.0% 100.0% -VMIHPLLSAA------------ 2 A0A0F2QU46_9PSED 96.9% 48.6% IIMLDPLCMHAEPPSGGAHTFLQ 3 A0A0M3LRG1_9CAUD 70.8% 29.8% ----------------------- 4 Q8XYV1_RALSO 71.3% 28.3% ----------------------- 5 A0A0A1I5U0_9CAUD 72.1% 30.0% ----------------------- 6 B4EEA7_BURCJ 71.8% 29.6% ----------------------- 7 V5UDF2_9BURK 72.1% 30.7% ----------------------- 8 W6MYA3_9VIRU 71.5% 37.0% ----------------------- 9 J9Z8X1_LEPFM 77.3% 29.0% ----------------------- 10 Q88A62_PSESM 77.5% 26.6% ----------------------- 11 A0A0F3IJY5_9GAMM 77.0% 21.4% ----------------------- 12 C5CWK1_VARPS 85.1% 20.9% ----------------------- 13 Q9T1R0_BPAPS 79.6% 16.6% ----------------------- 14 J7SJD1_MORMO 78.9% 17.4% ----------------------- 15 G8C7S0_9CAUD 78.9% 16.7% ----------------------- 16 A4W7K0_ENT38 78.9% 15.5% ----------------------- 17 K7P7R5_9CAUD 78.6% 18.1% ----------------------- 18 A0A0E9M9A6_9PROT 76.2% 16.6% ------------------LTF-- 19 E5AKM7_BURRH 80.2% 18.0% ----------------------- 20 Q45YI6_9CAUD 87.2% 16.8% ----------------------- 21 Q9T1P3_BPD3 80.2% 18.8% ----------------------- 22 16505416 74.2% 17.6% ----------------------- 23 E5G6L0_9CAUD 73.4% 19.4% ----------------------- 24 E0SAL2_DICD3 79.6% 15.0% ----------------G------ 25 F1BUS9_9CAUD 75.5% 14.2% ----------------------- 26 B2VHB7_ERWT9 74.9% 16.2% ----------------------- 27 A0A0A0Z398_9ENTR 74.7% 16.8% ----------------------- 28 Q1I119_9CAUD 74.2% 17.6% ----------------------- 29 C5BFY2_EDWI9 76.8% 16.5% ----------------------- 30 U5N0A8_9CAUD 71.5% 14.7% ----------------------- 31 A0A0F7LA05_9CAUD 72.1% 16.0% ----------------------- 32 A0A097QXD5_HAFAL 72.3% 16.3% ----------------------- 33 VINT_BPP2 73.1% 13.4% ----------------------- 34 A0A090ICP0_9GAMM 71.3% 16.8% ----------------------- 35 E8TMK0_MESCW 85.6% 17.5% ----------------------- consensus/100% ....................... consensus/90% ....................... consensus/80% ....................... consensus/70% .......................