222929.C5PE93_from_949_to_1119EDDDTIVLDLDGWQS---LIKDDEDINFLKKA---LSEHLAADIG--------NLAAWT- CONSENSUS/80% p..tth.h.hphhpt....hhD.EDh.hlp.h...hpth...t..............hh. CONSENSUS/65% st.cphpl.h-hhpp....shDtEDhphL+ps...hcph.tpsss..........t.Wh. CONSENSUS/50% spt-phsllhDhhps....shDpEDlpaL+ps...a-chhpscsu..........ssWl. 222929.C5PE93_from_949_to_1119----WKHKEIKAINR--------------GGDRGPVHSE--------TRVDGYYVPNPSG CONSENSUS/80% ....Wh........................t..t.tpp...............hh.p.oG CONSENSUS/65% ....Wht+......................s.hpppcpt............s.hh.psoG CONSENSUS/50% ....Whp+sh...................ssshccc+cc............sthhspsTG 222929.C5PE93_from_949_to_1119SARTEGRKRIRESEKSKYLPHRIKVQKAREERLAKAKNDPH------------------- CONSENSUS/80% sh+scGhh+l..tpK.tah.ttht.tt..t.............................. CONSENSUS/65% sARoEGahKIspp-KspYLspphphpps.pt.ptt......................... CONSENSUS/50% uARoEGYpKIsc+EKs+YLsH+p+sspstsshptptc....................... 222929.C5PE93_from_949_to_1119--AAAAEAARLLAAKSLSKSTSRSTRVNNRRLIADINAQKQaLPMQNGDSDVL CONSENSUS/80% ............tt.t.t.tsup.tRsppRRhhtsht.........st-o-ll CONSENSUS/65% ...........ssp.ptsppsuRpsRuppRRhlushss........ss-SDlL CONSENSUS/50% ...........sssssssppuSR-sRusQRRLluslsupt......us-SDLL
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |