OSTK_BOVIN LPVK----PTSSGSSEEK------QLNNKYPDAVATWLKPDPSQKQTFLAP--QNSVSSE CONSENSUS/80% lPVK.....spSGSSEEK......th.phasDslAohLpPDPSQKQshLsP..QNshSSE CONSENSUS/65% LPVK.....ssSGSSEEK......pL.sKasDAVATWLpPDPSQKQshLAP..QNulSSE CONSENSUS/50% LPVK....sA-SGSSEEK......QLYNKHPDAVATWLKPDPSQKQNLLAP..QNoVSSE OSTK_BOVIN ETDDN-KQNTLPSKSNEDPEQTDDLDDDDD-NSQDVN----SNDSDDAETTDDPDHSDES CONSENSUS/80% EpsD..KQpTLPSpSsES.-phDD.DDDDD............sDps-s-pssDsccSDES CONSENSUS/65% EsDDh.KQpTLPSpSNES.-phDD.DDDDD.s..........sDSs-u-pssDsDcSDES CONSENSUS/50% ETDDF.KQETLPSKSNESHDHMDDlDDDDDDDp.Dsp....SNDSDDAEcoDDSD+SDES OSTK_BOVIN HHSDESH--QVHFPTDIPTIAVFTPFIPTESANDGRGDRCGLRTE-VKIIEVPPINVQSP CONSENSUS/80% HpSDESD.....hsTt.s.htshTPhhPT.ss.sGRGDSlsYth+.uKu+.h.hsp.Q.s CONSENSUS/65% HHSDESD....caPT-.sthsshTPhlPT.-ssDGRGDSluYGL+.SKS+pFphSshQ.P CONSENSUS/50% HHSDESD...s-FPTDsPsssVFTPlVPTVDsNDGRGDSVAYGLR.SKSKcF+sS-lQYP OSTK_BOVIN D--ATEEDFTSHIESE-----------------------RCMSTKKTSRLTDHSKETNRC CONSENSUS/80% s..Ao-EDhTS+hcSpp......................tthss.csSp.s-.ShETpp. CONSENSUS/65% D..AT-EDhTSHhcSp-......................ptcsopcoSQlsD.ShETppp CONSENSUS/50% D..ATEEDLTSHlESEE.cts.+sIPVAQcLssPSD.DSpGKsS+ETSQLDD+SlET+Sp OSTK_BOVIN ELSKE----LMPKAKD---------------KNKHSNLIESQENSKLS-----QEFHSLE CONSENSUS/80% c.u+........cs.-...............psccSshI-SQtsuKhS.....pEF+Shc CONSENSUS/65% EpS+p....hp.cupD...............psc+SssI-SQtsSKlS.....pEFHSpE CONSENSUS/50% EQSKE....ho+KApDt..............SNEHSclIDSQESSKVS.E.pS+EFHSHE OSTK_BOVIN DKLDLDHKSEED-KHLKIRISHELDSASSEVN CONSENSUS/80% DtLsh-.KScE-.cahchRlSHEL-SsSSElN CONSENSUS/65% DKLslDsKScED.+aLKhRlSHEL-SuSSElN CONSENSUS/50% DKLVLDPKSEED-KHLKlRISHELDSASSEVN
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |