44689.DDBDRAFT_0188843_from_23_to_165/1-143DTNWSKYNR---AGK---KETVDFRIALNQRNL---DVLENTLLDVSNPESPNY------ CONSENSUS/80% ..t...ht....hss...st.lththhl..ps......h..hh.thtts........... CONSENSUS/65% ssshtthst...hss...sp.lphplhlt.psh...stLpthhtplpssts..a...... CONSENSUS/50% ssshspsus...lss...spplslslsLp.psh...stLpphlpclusPsSspY...... 44689.DDBDRAFT_0188843_from_23_to_165/1-143----------------GKHWTSEQVADLVA-----PEPYVSKKVANYLKKNGCHNVENHR CONSENSUS/80% ................tphls.tph.t.hh......s.tphttlhtalpttGhp...... CONSENSUS/65% ................t+aLo.pphtphat.....ssptshstVhsaLpstGhpshphss CONSENSUS/50% ................t+aLosscltstau.....PossslssVpsaLcupGlsstpsss 44689.DDBDRAFT_0188843_from_23_to_165/1-143------DYIKATGPVDSVEKIF-SVEMYNY-------------KHNIKSDQ--------- CONSENSUS/80% .......hl.hpssstthpphh.tsph.ha..............t.ts............ CONSENSUS/65% .....tthlthpuosuphpphh.ssphtha..............phsut........... CONSENSUS/50% ....spphlsssGTluplEpsF.soclppY..............ppsGp........... 44689.DDBDRAFT_0188843_from_23_to_165/1-143-----AIIRS--SETYQVPF-EI-SQYVHI---VSGISEL CONSENSUS/80% ......hhtt...t..tlPt.tl..t.l.h...lhshpth CONSENSUS/65% .....thhts..ssshplPt.tl.tshlth...lhGlssh CONSENSUS/50% .....shhss..sushslPs.sL.sstVss...VsGLssh
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |