100226.SCO1629_from_8_to_100FDWMLRDLYD--GVPGIEMIVVLSA-DGLRIARYS-----------------------G- CONSENSUS/80% ....h.t.h...ph.ssttshlhst.-Gh.lt............................ CONSENSUS/65% hh.hlhphlt..pssGlptslllst.DGlhlstst......................... CONSENSUS/50% hsptlhspls..pssGVpuulllos.DGLllusss......................... 100226.SCO1629_from_8_to_100DPDA----------ADRVAAACAGLQSLASA-VSQEIPTSDGDMKMVLIEMNGGY-FYLM CONSENSUS/80% .................huuhhsshhthstt.hst.ht..tsthp.hhlchtpt..lhlh CONSENSUS/65% sp.t...........ppluAhsuulhuhupt.hspphs..tsplpphhlchppsh.lhlh CONSENSUS/50% sssp..........s-plAAlsuulhuhucs.supcls..pGclcplhlcsccGp.llls 100226.SCO1629_from_8_to_100AAGP---------------NAYLAVLS CONSENSUS/80% .hst.................hlsllh CONSENSUS/65% ssup...............thhLslls CONSENSUS/50% ssGc...............sthLsVls
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |