6459294/1-223 MPRHFGAVPGVVPGMAFVNRQELRDAGVHLPTQAGISGSA--------SEGADSIVLSGG CONSENSUS/80% ..p..s...Gl.sG..a..R.phs.hGlHh.s.uGIshhh........p.hAsSlV.SGt CONSENSUS/65% ..phhG.lsGV.VGp.a..RhEhslhGlHtso.uGIchht.......tp.hAsSlVsSGG CONSENSUS/50% sp+hlGsVPGVpVGDhFhaRhELsllGLHpPTQAGIDshssp..ssss-slATSIVlSGG 6459294/1-223 YEDDRDEGDVILYTGEGGRDP------LTGHQVKPQQLVRGNLALAISHRDGL------- CONSENSUS/80% YcDc.-ps-slhYTGpGGps.........tttspsQpL.psNhALthShcht........ CONSENSUS/65% Y-D-tDsu-sllYTGpGGps........pttpspcQcL.pGNlALctShcpt........ CONSENSUS/50% YEDDsDcGDVLlYTGpGGsDh.......ps+QscDQ+LpcGNLALEsSh++Gs....... 6459294/1-223 -------PLRVTRGHR--HSSQFSPQSGYQYAGLYRVDDHWREVGRS-GFLIWRFRLTRL CONSENSUS/80% ........VRVlRuh+....pt.hstpsYhYDGlYhl.chW.phGps Gh.la+apLhR. CONSENSUS/65% ........VRVlRGh+....pp.ssucsYlYDGLYhlschW.csGps GhhVa+a+LhRh CONSENSUS/50% .......PVRVIRGhK...asspssu+lYlYDGLY+Is-aWpEsGKS GFtVFKF+LlRl 6459294/1-223 ENQ CONSENSUS/80% .sQ CONSENSUS/65% ssQ CONSENSUS/50% PGQ
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |