120605816 MENALSAPP-----------SMLTAP---------TWPDEASLAAFRAWLQGVPSRAAVD CONSENSUS/80% M........................................................... CONSENSUS/65% M........................................................... CONSENSUS/50% M........................................................... 120605816 RYLPD----RRTAGASARSVIGRVKRQLVAFATSRAQAELASTLAAA------SPSDRKL CONSENSUS/80% ....................hhslhc.ht.h............................. CONSENSUS/65% ...................sltslh-thshh............................. CONSENSUS/50% .............st.hcsslssLtDsLstl............................. 120605816 AR----------AAT--------------------AAIETLRGMPR-------------- CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ 120605816 ---------------------PQPLIGDAVERWLPVRLVDVLHAAGIRTLADLTLRVPRR CONSENSUS/80% .......................P.................................... CONSENSUS/65% .....................stP..t................................. CONSENSUS/50% ....................tspPthsp.lp............................. 120605816 R-RWWAGIAGLGPAGARHIEAFFAQHP----ALTERA---------RALITVN---QAQE CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ 120605816 LIPWERLVVPDDVD-------GSRGTFRA-PQASCALDASNDYQAVNAWLS---LHESAA CONSENSUS/80% ..s.p...............................hthtpDhptstsaLt..thtto.s CONSENSUS/65% .hPhc...............................htuspDhpAltsaLt..phspSts CONSENSUS/50% hhPlEtltlP.tls.......GptGh.Ru.stttstlcAspDLsAVpAWLs..pascSsu 120605816 TQRAYRKEAERLILWAIVERGRALSSLTTEDAIAY-RAFLRHPGPRARWVG--------- CONSENSUS/80% ThpsYRpEhERLlLWshl.tttslspLppcDh.ta..tFhhpP..s..Whs......... CONSENSUS/65% ThpsYR+EsERLLLWshltpspsLosLp+-Dh.tY.tpFltsPssu..Wlu......... CONSENSUS/50% TacuYR+ElERLLLWullppG+PLSSLo+EDltpY.pcFLtsPsPA..WlG......... 120605816 --------APQPRLSPAWRPFA----------------------GELSARSAAYALSVLN CONSENSUS/80% ........tth.h.s.tW+PF.......................h.hStto.pthhslls CONSENSUS/65% .....t.ttth.phsspWRPFs......................t.LStsohppshslLs CONSENSUS/50% .....tstsstsRssscWRPFs......................usLSsuStcpAhsILs 120605816 ALYRWLIEQRYVLANPFAGVKVR--GSRPAQLDT--------SHAFTEHEWKLLRVVADG CONSENSUS/80% shataLlpttahhsNPhthhppp...pphhh.p.........s+hls...WphVhthstt CONSENSUS/65% uhasaLlpptYltuNPhuhh+p+...s+hshhcs........sRhLoth.WphVhssstt CONSENSUS/50% uhFsWLlcpcYLtuNPhAll+p+...o+hsthcs........sRtLosspWchVcssscs 120605816 LEWSYGWS----------EPAAQRLRFMLDFAYATGLRISEFVGA-----RLGAVD---- CONSENSUS/80% h.pp.s...............hpRshalhshhhhhhLRloEhstt.....shuph..... CONSENSUS/65% hsppsutt.............tpRstallshhasthLRlSElsus.....sMGphh.... CONSENSUS/50% Lsccsupp..........thhtcRsRFlLslLYusGLRISELuus.....oMGcFt.... 120605816 SDA---HGDTWIGV-VGKGHKAGKVVLPPLARA-ALDRYLVQRGLP---VTPSKWRPSTP CONSENSUS/80% tDs...pttWalpl.hGKGp+.R.lshs.thhs..Ltcat..pGLs...shPs..c.spP CONSENSUS/65% tDu...ptpWWLcV.hGKGpKtRtVslssthls.tLtRYRtt+GLs...slPs.sE.ssP CONSENSUS/50% sDu...cspWWL+V.lGKGsKtRpVsloc-hls.tLcRYRptRGLP...sLPossE.soP 120605816 LIGSLGEDG--------------------SGIS-SWRLWRVMKRFFATAAEVVEEATP-- CONSENSUS/80% Llh.htttt.....................shs..ttltpllpthFthAtpphhtps... CONSENSUS/65% Llhtltupu.....................ulo.sttl+pllpplFstAAcplttps... CONSENSUS/50% LVhsl+Gpu....................tuLo.sssL+clVKplFcpAA-pLpscG..h 120605816 -ALAEKLRLATPHWTRHTHATHLLE-GGAELTTVRDNLRHASLATTSM-YLHTDDARRAK CONSENSUS/80% .ttAttLttAosHWLRHTtuop.ht..thslphlptshGHsSlsTTs..Ylps-.ppRtp CONSENSUS/65% tspAppLcpASsHWLRHTuuoatss.tthsLcpVp-sLGHuSluTTst.Ylcs-ppcRtp CONSENSUS/50% cscAccLcpASsHWLRHTuuoHslc.tst-L+sVR-sLGHASLuTTSp.Yl+o-pccR+c 120605816 QVADRFAVPRS------------------------------------------------- CONSENSUS/80% ps.tthh..................................................... CONSENSUS/65% pstc+hhh.h.................................................. CONSENSUS/50% sspc+attsht................................................. 120605816 ------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ 120605816 --------------- CONSENSUS/80% ............... CONSENSUS/65% ............... CONSENSUS/50% ...............
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |