162425.CADANIAP00000839_from_605_to_676DQNTAEQVFQSFREVADG-----------------KPYVTELDLRH-------------- CONSENSUS/80% s.pos-pl.tuF+hluts.................csals..-L................ CONSENSUS/65% stpou-plhpuF+hlAss.................KPYlTtp-Lp............... CONSENSUS/50% DscTuEQVhsSFRsLAu-.................KPYlTp-EL+............... 162425.CADANIAP00000839_from_605_to_676SLIPDEIIEHLVKTMP-------QHEGPDLLEDRDLPKYDYISFMERMMN CONSENSUS/80% t.ls.c.hcahhtpM..................t..sshDY.sF.ptlhs CONSENSUS/65% ppLs.-ps-ahhppMs...........ss....ts.suhDYhuFspsLau CONSENSUS/50% ppLss-QA-YCls+Ms........sYssst...sssuAaDYtSFssuLau
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |