cov pid 1 [ . . . . : . . . 80 1 Q72EL5_DESVH/106-218 100.0% 100.0% ---CANVCWSIDFM---HDALASGQ-------------------------------RFRTFNVLDDFSRECLAIEVDTN- 2 A6X7G7_OCHA4/41-154 99.1% 40.9% ---RANARWSLDFV---HDQ-FACGR------------------------------RFRVLNIVDDVTRECLAAIPDTS- 3 Q8PCY9_XANCP/159-274 99.1% 40.2% -PSQANQVWSMDFV---FDR-TAEGR------------------------------VIKCLVIVDDATHEAVAIEVERA- 4 Q8P9Q4_XANCP/175-289 99.1% 41.4% --SMPNDTWSMDFV---FDA-LANAR------------------------------RIKCLTVVDDFTRESVDIAVDHG- 5 Q63YU9_BURPS/105-218 99.1% 47.0% ---APNEVWSIDFV---MDA-LSNGR------------------------------RVKCLTVVDDFTKEAVDIVVDHG- 6 Q9RI26_YERPE/42-157 99.1% 41.9% -PAAPNLTWSMDFV---MDA-LATGR------------------------------RIKCLTCVDDYTKECLTVTVAFG- 7 P71639_MYCTU/157-273 99.1% 28.0% EAEHPNALWTGDVL--HGIRIDLRK--------------------------------TYLFAFLDDHSRLVPGYRWGHA- 8 A6TIM0_KLEP7/185-325 100.0% 18.4% -VTAPLEQVQIDHT---VIDLIVVDDRDR-----------------------QPIGRPYLTLAIDVFTRCVLGMVVTLEA 9 B7JB79_ACIF2/278-419 99.1% 13.3% --VGPASRYQIDATIADVYLVSRYDRTK-------------------------IVGRPVLYIVIDVFSRMITGVYVGFEG 10 A0A1B1P491_STAPS/156-285 100.0% 20.0% -SSRPNEIWQADHT---LLDIFILDQKG-------------------------NINRPWLTIIMDDYSRAIAGYFLSFD- 11 Y4601_AGRFC/28-148 100.0% 21.5% ---RSNLRWCSDGL---EFACWNGE-------------------------------VIRLAFIIDAFDREIIAWTAVANA 12 C5A8D3_BURGB/109-231 100.0% 20.3% -VERSNQRWCSDGF---EFRCDNGE-------------------------------PLRVTFALDCCDREAMSWAATTA- 13 Q7APC2_RHIME/106-228 100.0% 21.1% -VERSNIRWCSDGF---EIGCDNKE-------------------------------KVRVAFALDCCDREAIAHVATTE- 14 A6X1S5_OCHA4/107-219 96.5% 16.5% --EAPDTAWVTDIT---YIR--TCEG------------------------------FAYLAVVIDLYSRRVIGWAMQSR- 15 F9VEV0_LACGL/68-184 99.1% 21.2% -PNSPNQVWTTDFT---YIS-IGPKR------------------------------HVYLCAILDLYSRKCIAWKVSDR- 16 Q8E0T3_STRA5/107-222 99.1% 21.4% --DKPNQVWSTDFT---YIS-IGYKK------------------------------YVYLCAILDLYSRKCIAWKLSHR- 17 I3U489_ENTFC/38-151 99.1% 17.4% --DNPLEAIVTDLT---YVRVGKKW--------------------------------NYVCFILDLFNREILGYSCGEH- 18 Q03B13_LACP3/103-218 98.2% 16.9% --FKPFEALSSDIT---QTT--TSEG------------------------------KAYICQIRDLNSNLVLAHQISNH- 19 P73967_SYNY3/53-168 98.2% 18.6% EINRANQVWCTDIT---YLP--IGKG------------------------------YYYLVVIMDWYSRRVLSWRISNT- 20 Q7M7F9_WOLSU/234-344 96.5% 21.2% --NRANQVWSGDIT---YIPIK--GG------------------------------FVYLCAIIDWHSKTILSWKISTT- 21 Q6FCT6_ACIAD/110-224 98.2% 17.9% --NEPNKIWTTDIT---YIR--TKQG------------------------------WLYLCVMLDLFSRRIVGWQTSHR- 22 Q7CM18_LEPIN/121-236 98.2% 16.9% -PNQKNRIWVSDIT---FLR--SSFG------------------------------WIYLCVILDLYSRKVVGWSISNS- 23 Q8CLY2_LEPIN/105-221 98.2% 16.8% -PNEQNRIWVSDVT---FIR--TSFG------------------------------WSYLCVILDLYSRKTVGWSLSDR- 24 Q328A8_SHIDS/106-222 98.2% 17.6% -VTEPNQVWCGDVT---YIW--TGKR------------------------------WAYLAVVLDLFARKPVGWAMSFS- 25 T904_LACLA/91-207 98.2% 16.8% -ATAPNKVWLGDMT---YIP--TKEG------------------------------TLYLAVNIDVFSRKIVGWSMSSR- 26 Q32H63_SHIDS/71-186 98.2% 14.4% -PTAPNQVWVADLT---YVA--TQEG------------------------------WLYLAGIKDVYTCEIVGYAMGER- 27 Y1721_HAEIN/54-170 95.6% 18.0% TATQPNEKWTTDIT---EFKCA--EG------------------------------KLYLSPIKDLFNNEIIAYDLARS- 28 Q8DYF6_STRA5/114-228 97.3% 16.9% -GSKPYEKCYTDVT---EFALP--EG------------------------------KLYLSPVLDGYNSEIIDFTLSRS- 29 K7XY25_MYCHR/36-152 98.2% 18.5% -ATQPNQKWTTDVT---EFS--GPFG------------------------------KAYLSPILDMFNGEVIAWDLSTS- 30 Q9CB06_LACLA/105-225 100.0% 11.6% --SIPHQKITTDTT---EFKYYEDGIQ----------------------------KKCYLNPYIDLFNSEVISYHISKQ- 31 INSK_ECOLI/117-234 99.1% 17.6% KATRPNEKWVTDVT---EFAVNGRK--------------------------------LYLSPVIDLFNNEVISYSLSER- 32 Q03XH7_LEUMM/40-147 94.7% 18.2% -------VLTTDIT---YIQLMNRN-------------------------------WVYLATVYDPEKRRVVSYGLSSE- 33 Q7DAW1_LACLA/116-233 98.2% 17.5% EPTKKNKVWSTDIT---YIP--TQQG------------------------------WAYLSTIMDRYTKKVIAWDLGKR- 34 G2PGW7_STRVO/120-238 98.2% 17.4% -ASRPDQLWVADMT---YVR--TWSG------------------------------WAYVAFVLDVYSRMIVGWQVANH- 35 TRA9_MYCTU/102-222 98.2% 17.1% -PPAPNRLWVADLT---YVS--TWAG------------------------------FAYVAFVTDAYARRILGWRVAST- 36 Q326M8_SHIDS/37-151 98.2% 17.9% -AERPDQLWVADFT---YVS--TWQG------------------------------FVYVAFIIDVFAGYIVGWRVSSS- 37 Q82T33_NITEU/30-144 98.2% 20.5% --NRPNQLWVSDFT---YVS--TWQG------------------------------WLYVAFVIDVFARRIVGWRVSST- 38 O86606_STRCO/115-235 99.1% 18.9% AAQMPNTKNVGDIT---CLP-VGNGQ------------------------------FLYLATVLDLCSKRLTGWSIADH- 39 Q8FSL3_COREF/34-150 100.0% 20.5% -ADKPNQLYVGDIT---YLPIADGS-------------------------------NMYLATVIDCYSRRLVGFSIADH- 40 I6YC39_MYCTU/135-252 99.1% 20.3% -AHQPNSVWSWDIT---KLRGPAKWS------------------------------YYYLYVILDIFSRYVVGWMVASR- 41 Y4JA_SINFN/125-259 96.5% 10.8% QTHEPGRLGLSDFT---DMGSLSVTIAG-------------------------QPLDHLLYHFRLVWSGFEHAHVILGG- 42 Q3XXA7_ENTFC/55-164 96.5% 12.3% --KKSFYSWKMDET---YIKIKGKW--------------------------------HYLYRAIDADGLTLDIWLRKKR- 43 Q5HK26_STAEQ/66-174 94.7% 14.2% -HKKAYYKWRIDET---YIKIKGKW--------------------------------SYLYRAIDAEGHTLDIWLRKQR- 44 POL_HTL1C/1223-1331 96.5% 22.5% ----PNHIWQGDIT---HFKYKNTL--------------------------------YRLHVWVDTFSGAISATQKRKE- 45 POL_HTLV2/1218-1332 98.2% 17.1% RGLLPNHIWQGDVT---HYKYKKYK--------------------------------YCLHVWVDTFSGAVSVSCKKKE- 46 POL_HTL32/1198-1309 97.3% 16.7% -GHAPNDIWQGDVT---HLQYKRYK--------------------------------YCLLVWVDTYSGAVSVSCRRKE- 47 POL_RSVSA/1336-1447 98.2% 17.5% ---GPLQIWQTDFT---LEPRMAPR--------------------------------SWLAVTVDTASSAIVVTQHGRV- 48 F9W6J4_TRYCI/667-777 98.2% 18.6% ---RPLQVWQMDVT---HVSSFGKL--------------------------------QYLHVSIDTCSGIMFASPLTGE- 49 W5QF10_SHEEP/660-771 96.5% 16.4% --LRPNHLWQTDVT---HIP--QFGR------------------------------LKYVHVSIDTFSNFLMASLHTGE- 50 POK10_HUMAN/642-756 96.5% 16.0% RGLCPNALWQMDVT---HVPSFGRL--------------------------------SYVHVTVDTYSHFIWATCQTGE- 51 POL_MMTVC/1493-1603 96.5% 13.0% ---KPRVLWQMDVT---HVSEFGK--------------------------------LKYVHVTVDTYSHFTFATARTGE- 52 POL_WDSV/1482-1596 97.3% 20.3% LPSRPFAHLQIDFV---QMCVKKPM---------------------------------YALVIIDVFSKWPEIIPCNKE- 53 POL_XMRV6/1443-1557 98.2% 20.5% -GHRPGTHWEVDFT---EVK-PGLYG------------------------------YKYLLVFVDTFSGWVEAFPTKRE- 54 F9W7M6_TRYCI/366-480 100.0% 21.7% -GDHPGVYWEVDFT---EVKPGMYG-------------------------------NKYLLVFVDTFSGWVEAFPTKTE- 55 P71644_MYCTU/136-254 98.2% 13.2% EAPKVPGVIEADTV--AHCGPSLIGE------------------------------FARTLTMTDLVTGWTENASIRNN- 56 POL_HV2BE/1225-1332 93.8% 19.1% --NAEIGVWQMDYT---HLE----G--------------------------------KIIIVAVHVASGFIEAEVIPQE- 57 YAGA_ECOLI/137-258 98.2% 25.8% EHDAPNRLWQMDFK--GHFP--FGGG------------------------------RCHPLTLLDDHSRFSLCLAHCTD- 58 O28959_ARCFU/127-246 95.6% 18.4% ERTHSMSLWQGDWK---RLG------------------------------------EKWIIAFMDDASRFITCYGVFDS- 59 YJ41B_YEAST/620-742 99.1% 12.1% TDHEPGSSWCMDIF--GPVSSSNADT------------------------------KRYMLIMVDNNTRYCMTSTHFNK- 60 E7KRB4_YEASL/2-117 95.6% 19.0% --------VQADLC--GGFRYQEFQS------------------------------NKYFLTIRDAYSRYYSVIHLKSK- 61 YD11B_YEAST/660-782 99.1% 12.9% NSYEPFQYLHTDIF--GPVH-NLPNS-----------------------------APSYFISFTDETTKFRWVYPLHDRR 62 K4CL29_SOLLC/120-235 99.1% 22.4% ----ILDLVYSDVC--GPMEIESIGG------------------------------NKYFVTFIDDASRKKWVYILRTK- 63 A3N0V8_ACTP2/160-284 98.2% 17.3% -TAHPGYLGSQDTF--YVGN-LKGVG------------------------------RIYQQTFVDTYSKVAFAKLYTMK- 64 Q9KTS1_VIBCH/132-242 95.6% 19.8% -RPIPGDRVQMDTC---KIA---PG--------------------------------IYQYTAIDDCSRYRVLRCYSRR- 65 INTG_SPV1C/179-314 98.2% 13.8% YEVKEIGLLQMDAK---YFV-PSKFSV---------------------------DKKYYVYDFIDEKTRLALGYVYDKL- 66 Q4JUC9_CORJK/130-281 99.1% 19.0% EHPHPGSLIHVDVT--KFGNIPDGGGHRYVGRQQGARNKLATPGLPRGKDHKPRTGTAFVHTVIDDHSRVAYAEIWSDE- 67 O86758_STRCO/130-269 97.3% 15.4% ERARPGELVHIDVK--KLGRIPDGGGHKTLGRAEG------------HRSRTNGAGWAYLHTALDDHSRIAYTEDLPDE- 68 O86023_CLAMS/137-276 99.1% 16.3% EHEHPGDLIHVDVK--KLGRIPDGGGWRVHGRSE--------------QVRGRGIGFDYVHAAVDDHTRLAYAEIHPDE- 69 INTG_SPV1R/173-280 92.9% 14.2% ------GWLEMDTV---VGK--DHK--------------------------------SAILVLVEQLSKKYFAIKLENH- 70 Q4JWM1_CORJK/216-324 92.9% 18.3% -----PGHWEGDLV---IGK----GG------------------------------KSALITLVERTSRYTLLGHLPDE- 71 O53337_MYCTU/180-292 95.6% 12.7% ADRSEPGHWEGDLI---VGK--NQG--------------------------------SAIGTLVERQTRLIRLLHLPTH- 72 TRA8_CUPMC/175-287 94.7% 18.5% NDRLMPGHWEGDLI---KGA--GNQ--------------------------------SAVGVLVERMSRAVLLVKMPDA- 73 INSI4_ECOLI/226-337 93.8% 16.8% DNRRSLGHWEGDLV----SG--TKN--------------------------------SHIATLVDRKSRYTIILRLRGK- 74 I6X5T4_MYCTU/115-244 97.3% 15.2% ----AGEIAQCDFWF-PPIELPVGFGQTR------------------------TAKQLPVLTMVCAYSRWLLAMLLPSR- 75 Q5LF59_BACFN/170-296 98.2% 12.6% -----GEYAQADFG---EKWIPVKNGG---------------------------STKVYFFAIVLTRSRYKFIHFSRRP- 76 A0A0A1BBC9_9GAMM/130-256 99.1% 10.9% ---ACGEAFQFDWSE-DFARIAGKQV------------------------------KLQIAQFKLAHSRAFVLRAYYQQ- 77 B7GM82_ANOFW/119-243 96.5% 11.9% ------EQMQVDWK--EVGEVVIEGKK----------------------------VKLSLFVAVLGYSRMKYAVFTTSQ- 78 Q9RI04_YERPE/30-157 99.1% 13.2% -ETQPGYQLQHDWGE-VELEVAGQRC------------------------------KVNFAVNTLGFSRRFHVFAAPKQ- 79 Q3L9G2_RHOE4/119-243 99.1% 16.7% -VTEPGLWLQYDFG---DGPTISGR-------------------------------KTTLFCAWLAWSRFRVVIPIWDK- 80 Q7ARN5_YERPE/118-242 96.5% 12.5% --TEPGRQMQVDWG---TMR--NGRS------------------------------PLHVFVAVLGYSRMLYIEFTDNM- 81 Y3428_MYCTU/53-175 95.6% 14.8% IDYGRLGMWFDPAT---ARRVA-----------------------------------VWAFVMVLAFSRHLFVRPVIRM- 82 Y4UI_SINFN/137-270 96.5% 11.6% QSHAGGEKLFVDYAG-DKVAVVDRKTGV--------------------------VRDAHIFVAVMGASSLSFALATWSE- 83 Y4BL_SINFN/140-273 99.1% 11.1% NRHAAGAVMQTDYAG-PTVPVIDPATGV--------------------------IHPAQIFVAVLGASNLTFAHASFSQ- 84 A4VHC8_PSEU5/128-259 99.1% 16.5% -EHRVGEKLFVDYAG-QTVPVIDRHSGE--------------------------IRRAQVFVAVLGASSYTFAEATWSQ- 85 B4E7R1_BURCJ/140-272 99.1% 17.2% QQHRAGEKLFADFAG-PTVPVLASDGGV--------------------------EFEAHVFVAVLGASNNTFACATRTE- 86 O69924_STRCO/154-280 94.7% 10.5% AQAQVDWGDEGKIL--AHVGIP----------------------------------KVYSFHMTLSYSRDPFCCFTTSQ- consensus/100% ...............................................................h...t............ consensus/90% .......hh..Dhh....h.......................................hhh.hh..hst.h....h.tt. consensus/80% ...ts.thh.hDhh....h......................................hhhhhhl-.hop.hhsh.h.pp. consensus/70% ...tssthhphDhs...hht..t.t................................hhlhshlDhho+hhhsh.htpp. cov pid 81 . 1 . . . . : . 160 1 Q72EL5_DESVH/106-218 100.0% 100.0% ------LPAARVLRVLDRIVAWRGL---------------PAKLRMDNGPELISV---------------LLADWAEKNG 2 A6X7G7_OCHA4/41-154 99.1% 40.9% ------ISGRRVARELTDLISRRGK---------------PGMIVSDHGTEFTSN---------------AILAWSKDHR 3 Q8PCY9_XANCP/159-274 99.1% 40.2% ------ISGHGVTRVLDRLAHSRGL---------------PKVIRTDNGKEFCGK---------------AMVAWAHARN 4 Q8P9Q4_XANCP/175-289 99.1% 41.4% ------ISGAYVVRLLDQAACFRGY---------------PRAVRTDNGPEFTSR---------------AFIAWTQQHG 5 Q63YU9_BURPS/105-218 99.1% 47.0% ------ISGLYVARALDRAARFRGY---------------PKAVRTDQGPEFTSR---------------ALDQWAYANG 6 Q9RI26_YERPE/42-157 99.1% 41.9% ------ISGVQVTRILDSIALFRGY---------------PATIRTDQGPEFTCR---------------ALDQWAFEHG 7 P71639_MYCTU/157-273 99.1% 28.0% ------EDTVRLAAALRPALASRGV---------------PNAVYVDNGSPYVDA---------------WLLRACAKLG 8 A6TIM0_KLEP7/185-325 100.0% 18.4% -----PSAVSVGLCLVHVACDKRPWLEGLNVEMDWQMSGKPLLLYLDNAAEFKSE---------------ALRRGCEQHG 9 B7JB79_ACIF2/278-419 99.1% 13.3% PSWVGAMMALSNTATEKVEYCRQFGVEIGAAD--WPCQALPDALLGDRG-EIAGS---------------AIETLINNFQ 10 A0A1B1P491_STAPS/156-285 100.0% 20.0% ------APNAQNTALTLHQAIWNKNDTNWP------VCGIPEKFYTDHGSDFTSH---------------HMEQVAIDLK 11 Y4601_AGRFC/28-148 100.0% 21.5% -----GISGSDVRDMMLEAVEKRFHATRA---------PHAIEHLSDNGSAYTAR---------------DTRLFAQALN 12 C5A8D3_BURGB/109-231 100.0% 20.3% -----GHSGDIVRDVMLAAVESRFGDVLH--------TESEIEWLSDNGSGYTAE---------------ETRQFAALLG 13 Q7APC2_RHIME/106-228 100.0% 21.1% -----GIKSQDVQDLVITAVENRFGRINM--------LSEPIEWLTDNGSCFIAK---------------DTASLLRDIG 14 A6X1S5_OCHA4/107-219 96.5% 16.5% ------QTTDVVLQALLMAVWRRKPKD-------------KVLIHSDQGSQFTSM---------------DWALFLRHHN 15 F9VEV0_LACGL/68-184 99.1% 21.2% ------IDAKLACDTLEIAINKRKPKE-------------PIIFHSDQGSQFKSA---------------SFRKLLDEHQ 16 Q8E0T3_STRA5/107-222 99.1% 21.4% ------MDAKLACNTLELALNKRKIEG-------------TLLFHSDQGSQFKAR---------------EFRKIIDDNN 17 I3U489_ENTFC/38-151 99.1% 17.4% ------KDAVLVKKAFSRIKQPLTE---------------VEIFHTDRGKEFDNQ---------------AIDELLTTFD 18 Q03B13_LACP3/103-218 98.2% 16.9% ------MDTDLVLATLKQAHQRWALPE-------------TCIFHSDRGSQYTAK---------------AVTKLVNQYH 19 P73967_SYNY3/53-168 98.2% 18.6% ------MDVKFCCNALEEALEKYGK---------------PEIFNSDQGSQFTSK---------------EFTQILLQAE 20 Q7M7F9_WOLSU/234-344 96.5% 21.2% ------MDTSLVTDVLKEAIEKYDI---------------PVIFNSDQGSQYTSH---------------EHTELLKKHN 21 Q6FCT6_ACIAD/110-224 98.2% 17.9% ------IDRQLVCDAFHYAMARQGYPM-------------GVMVHSDQGSQYCSR---------------DFRALLLTNN 22 Q7CM18_LEPIN/121-236 98.2% 16.9% ------NDSKLVCTALSKAIECRNPPK-------------GLVFHSDRGSNYCSY---------------ETRRYLLNNK 23 Q8CLY2_LEPIN/105-221 98.2% 16.8% ------NDSQLVCDTVLKAVLSRNPRK-------------GLIFHSDRGSNFCSK---------------ETRRLLITNG 24 Q328A8_SHIDS/106-222 98.2% 17.6% ------PDSRLTIKALKMAWEIRSKPA-------------GVMFHSDQGSHYTSR---------------QFRQLLWRYQ 25 T904_LACLA/91-207 98.2% 16.8% ------MQDKLVRDCFLQACGKEHPQP-------------GLIVHTDQGSQYTSS---------------RYQSTLRQVG 26 Q32H63_SHIDS/71-186 98.2% 14.4% ------MTKELTGKALFMALRSQRPPA-------------GLIHHSDRGSQYCAY---------------DYRVIQEQSG 27 Y1721_HAEIN/54-170 95.6% 18.0% ------PNFEQITRMMKQAVARLEGAK--------------PILHSDQGWQYQ--M-------------IGYQNILRENG 28 Q8DYF6_STRA5/114-228 97.3% 16.9% ------PDLKQVQTMLERAFPAASYSE--------------TILHSDQGWQYQHK---------------SYHQFLEDKG 29 K7XY25_MYCHR/36-152 98.2% 18.5% ------ANNQQIRKMLQRAFSKHKNLE-------------GLIFHSDQGWQYQHK---------------QFSEKLKQKG 30 Q9CB06_LACLA/105-225 100.0% 11.6% ------PSYQSIDIALNQALAVTSDCP------------YRRTFHSDQGWGYQMR---------------DYVSKLKSHR 31 INSK_ECOLI/117-234 99.1% 17.6% ------PVMNMVENMLDQAFKKLNPHE-------------HPVLHSDQGWQYRMR---------------RYQNILKEHG 32 Q03XH7_LEUMM/40-147 94.7% 18.2% ------MTKEFATSVVVKALRANGK---------------PKMIHSDMGSQYTSS---------------LFEGTLQNAG 33 Q7DAW1_LACLA/116-233 98.2% 17.5% ------MTVELVQRTLNKAIKSQDYPE-------------AVILHSDQGSQYTSL---------------EYEELLKYYG 34 G2PGW7_STRVO/120-238 98.2% 17.4% ------MRTELPLDALEMALWRRRIKKD-----------SGLIHHSDRGSQYVSI---------------RYTDRLSDIG 35 TRA9_MYCTU/102-222 98.2% 17.1% ------MATSMVLDAIEQAIWTRQQEGVL--------DLKDVIHHTDRGSQYTSI---------------RFSERLAEAG 36 Q326M8_SHIDS/37-151 98.2% 17.9% ------METTFVLDALEQALWARRPS--------------GTVHHSDKGSQYVSL---------------AYTQRLKEAG 37 Q82T33_NITEU/30-144 98.2% 20.5% ------MSTDFVLDALEQALYDRRPAD-------------TLIHHSDRGSQYVSI---------------RYTERLAQAG 38 O86606_STRCO/115-235 99.1% 18.9% ------MPTSLVTDVLRAAARARGGDGL-----------RGAISHSGNGAQYVSK---------------EFAQVCSELG 39 Q8FSL3_COREF/34-150 100.0% 20.5% ------MRTSLVQDALLMAKGQRGNLK-------------GAIFHSDHGSVYTSN---------------AFQDACKDLG 40 I6YC39_MYCTU/135-252 99.1% 20.3% ------ESKVLAERLIAQTLAAQHISA------------DQLTLHADRGSSMSSK---------------PVALLLADLG 41 Y4JA_SINFN/125-259 96.5% 10.8% ------ESFVALAEGLQNALWSVGGS--------------PLYHRSD--S--LSAAFRNLDADAKVDLTNRYEELCAHYR 42 Q3XXA7_ENTFC/55-164 96.5% 12.3% -------DTQAAYAFLKRLVKQFDE---------------PKVVVTDKAPSITS----------------AFKKL-KEYG 43 Q5HK26_STAEQ/66-174 94.7% 14.2% -------DNHSAYAFIKRLIKQFGK---------------PQKVITDQAPSTK-V---------------AMAKVIKAFK 44 POL_HTL1C/1223-1331 96.5% 22.5% -------TSSEAISSLLQAIAYLGK---------------PSYINTDNGPAYISQ---------------DFLNMCTSLA 45 POL_HTLV2/1218-1332 98.2% 17.1% -------TSCETISAVLQAISLLGK---------------PLHINTDNGPAFLSQ---------------EFQEFCTSYR 46 POL_HTL32/1198-1309 97.3% 16.7% -------TGSDCVASLLVAISILGK---------------PQNINTDNGAAYLSQ---------------EFQQFCNSLA 47 POL_RSVSA/1336-1447 98.2% 17.5% -------TSVAAQHHWATAIAVLGR---------------PKAIKTDNGSCFTSK---------------STREWLARWG 48 F9W6J4_TRYCI/667-777 98.2% 18.6% ------KASHVIQHCLEAWSAWGKP----------------RLLKTDNGPAYTSQ---------------KFQQFCRQMD 49 W5QF10_SHEEP/660-771 96.5% 16.4% -------STRHCIQHLL-FCFSTSGI--------------PQTLKTDNGPGYTSR---------------SFQRFCLSFQ 50 POK10_HUMAN/642-756 96.5% 16.0% ------STSHVKKHLLSCFAVMGVPEK----------------IKTDNGPGYCSK---------------AFQKFLSQWK 51 POL_MMTVC/1493-1603 96.5% 13.0% ------ATKDVLQHLAQSFAYMGFPQK----------------IKTDNAPAYVSR---------------SIQEFLARWK 52 POL_WDSV/1482-1596 97.3% 20.3% -------DAKTVCDILMKDIIPRWGL--------------PDQIDSDQGTHFTAK---------------ISQELTHSIG 53 POL_XMRV6/1443-1557 98.2% 20.5% ------TAKVVSKKLLE-DIFPRFGM--------------PQVLGSDNGPAFASQ---------------VSQSVADLLG 54 F9W7M6_TRYCI/366-480 100.0% 21.7% ------TAQIVAKKILEEILPRFGI---------------PKVIGSDNGPAFVAQ---------------VSQGLATQLG 55 P71644_MYCTU/136-254 98.2% 13.2% ------AAKWILEGIKECQQRFPFPMT---------------VFDSDCGGEFINH---------------DVAGWLQARD 56 POL_HV2BE/1225-1332 93.8% 19.1% ------SGRQTALFLLK--LASRWP---------------ITHLHTDNGPNFTSQ---------------EVKMVAWWVG 57 YAGA_ECOLI/137-258 98.2% 25.8% ------ERRETVQQQLVSVFERYGL---------------PDRMTMDNGSPWGDTTG----------TWTALELWLMRLG 58 O28959_ARCFU/127-246 95.6% 18.4% ------ATTENTIRVLKVGFREYGI---------------PDEILTDHGTQFVAAKSRE-------KAKHRFREFLAENG 59 YJ41B_YEAST/620-742 99.1% 12.1% -------NAETILAQVRKNIQYVETQFD----------RKVREINSDRGTEFTND---------------QIEEYFISKG 60 E7KRB4_YEASL/2-117 95.6% 19.0% ------ADASIKFMEWINETEQYFSSRGG---------FKVGFVRTDNGTEFVNK---------------NLHAFFESKG 61 YD11B_YEAST/660-782 99.1% 12.9% -----EDSILDVFTTILAFIKNQFQAS-------------VLVIQMDRGSEYTNR---------------TLHKFLEKNG 62 K4CL29_SOLLC/120-235 99.1% 22.4% ------DQVFQVFQKFHALIERETGRK-------------LKRLRTDNGGEYTSR---------------EFEEYCSNHG 63 A3N0V8_ACTP2/160-284 98.2% 17.3% -------TAIAAADMLNDKVLPFFEAQG----------LPMLRILTDRGSEYCGKVE-----------NHDYELYLAIND 64 Q9KTS1_VIBCH/132-242 95.6% 19.8% -------TAANTVDFIDCVVEEMPFP--------------IQRIQTDRGREFFAE---------------KVQKQLMIYG 65 INTG_SPV1C/179-314 98.2% 13.8% -------STDNAIDAVKKAISDFKNIFG----------IIITRIRTDNGSEFINNYRNNQK---ISVKKTNFTQFLTDKN 66 Q4JUC9_CORJK/130-281 99.1% 19.0% -------QASTAVGVLERAVAWFAERGV-----------TVERVLSDNGSAYRSH---------------AWRDFCARLG 67 O86758_STRCO/130-269 97.3% 15.4% -------TAPTCAAFLVRATAYFASLGI-----------RIERVLTDNAWAYS--K-------------NTWRNTCRDLD 68 O86023_CLAMS/137-276 99.1% 16.3% ------KGATAAGFLTRAAAYFAGHGIT-----------RIERVITDNAFAYR-HS-------------TAFKNAVQDLG 69 INTG_SPV1R/173-280 92.9% 14.2% ------TAREVEKKFKDIIIKNNLIGK-------------IKGIITDRRKEFS-----------------KWREMEIFAE 70 Q4JWM1_CORJK/216-324 92.9% 18.3% ------HSSHTVVATLQDMVKDLNTEQ-------------LKTITWDQGAEMA-----------------VTAQVQIKDG 71 O53337_MYCTU/180-292 95.6% 12.7% ------DAYCLRIAITETMSDLPVTL--------------VRSITWDQGIEMA-----------------RHIDITADLG 72 TRA8_CUPMC/175-287 94.7% 18.5% ------TAASALAGFTGKLQSLVAPLR--------------QTLTYDQGREMA-----------------RHAELSAATG 73 INSI4_ECOLI/226-337 93.8% 16.8% ------DSVSVNQALTDKFLSLPSELR--------------KSLTWDRGMELA-----------------RHLEFTVSTG 74 I6X5T4_MYCTU/115-244 97.3% 15.2% -------CAEDLFAGWWRLIEALGAV--------------PRVLVWDGEGAIG-RWRGGR-----SELTTECQAFRGTLA 75 Q5LF59_BACFN/170-296 98.2% 12.6% ------FDTELAIYAHELAFQYFGGR--------------PEKIIYDQDRVLIARENLGD-----LILTGKFQSFIKEQH 76 A0A0A1BBC9_9GAMM/130-256 99.1% 10.9% -------KHEMLFDAHWHAFQIFGGI--------------PKRGIYDNMKTAVDSVGRGK----ERRVNQRFTAMVSHYL 77 B7GM82_ANOFW/119-243 96.5% 11.9% ------DQEHLMECLIQ-SFKYFGGV--------------PKKVLFDNMKTVTDGREQGV-----VKWNQRFSEFASYYG 78 Q9RI04_YERPE/30-157 99.1% 13.2% -------DAEHTYESLVRAFRYFGGS--------------VKTVLVDNQKAAVLKNNNGK-----VVFNSGFLLLAEHYD 79 Q3L9G2_RHOE4/119-243 99.1% 16.7% -------TLPTVAACLDATFRRLGGV--------------PVYVLTDNEKTATIDHVAGI-----AVRNPEIVEVARHYG 80 Q7ARN5_YERPE/118-242 96.5% 12.5% -------RYDTLETCHRNAFRFFGGV--------------PREVLYDNMKTVVLQRDAYQT--GQHRFHPSLWQFGKEMG 81 Y3428_MYCTU/53-175 95.6% 14.8% -------DQTAWCACHVAAFEFFDGV--------------PARLVCDNLRTGVDKPDLYD-----PQINRSYAELASHYA 82 Y4UI_SINFN/137-270 96.5% 11.6% -------QLPDWIEAHNAAYRFFGGVTQ-----------L---LVSDNTKCAVIKACHFD-----PMVNRSYTDMARHYS 83 Y4BL_SINFN/140-273 99.1% 11.1% -------QLPDWIDGQVRALTFYGGV--------------TKAIVCDNLKSGVAKALWFE-----PTLTATFAAMAEHYD 84 A4VHC8_PSEU5/128-259 99.1% 16.5% -------QLPDWLGSHTRCFAFLGGV--------------PEIVVPDNLRSAVSKAHRYE-----PDINPSYRDLAEHYG 85 B4E7R1_BURCJ/140-272 99.1% 17.2% -------TMADWIGSLCDALEFIGGV--------------PELLVPDNPKALIARPDRYE-----PGLGTTTQDFVNHYG 86 O69924_STRCO/154-280 94.7% 10.5% -------DLATFFDCHRKAFAHFGGV--------------PMSVVYDRTKTVV--RRHVAPG-EAVPLHPEAVAFAGHYD consensus/100% ..............................................s................................. consensus/90% .......t...h.t.h...h.......................h..Dpt.thh.................th.thh.t.t consensus/80% .......sh..hhthh..hh..ht..................hhhsDpu.thht................thtthhtpht consensus/70% .......stphshphhttththht................s.hhhoDpGtpassp...............thpphhtphs cov pid 161 . . ] 188 1 Q72EL5_DESVH/106-218 100.0% 100.0% VALEFIQPGKPTQNSYIERFNKTYREE- 2 A6X7G7_OCHA4/41-154 99.1% 40.9% VEWHYIAPGKPMQNGYVESFNGRMRDEL 3 Q8PCY9_XANCP/159-274 99.1% 40.2% VQLRLIQPGKPNQNAYVESFNGRLRDEC 4 Q8P9Q4_XANCP/175-289 99.1% 41.4% IEHILIEPGAPTQNAYIESFNGKFRDEC 5 Q63YU9_BURPS/105-218 99.1% 47.0% VTLKLIQAGKPTQNAYIESFNGKFRDEC 6 Q9RI26_YERPE/42-157 99.1% 41.9% VELRLIQPGKPTQNGFIESFNGRFRDEC 7 P71639_MYCTU/157-273 99.1% 28.0% VRLVHSTPGRPQGRGKIERFFRTVREQF 8 A6TIM0_KLEP7/185-325 100.0% 18.4% IRLDYRPLGQPHYGGIVERIIGTAMQMI 9 B7JB79_ACIF2/278-419 99.1% 13.3% VRVENAAPYRADWKGIVEQRFRLIPAR- 10 A0A1B1P491_STAPS/156-285 100.0% 20.0% INLMFSKVGVPRGRGKIERFFQTVNQT- 11 Y4601_AGRFC/28-148 100.0% 21.5% LTPCFTPVASPQSNGMSEAFVKTLKRD- 12 C5A8D3_BURGB/109-231 100.0% 20.3% LKPLTTPVCSPQSNGMAESFVKTMKRD- 13 Q7APC2_RHIME/106-228 100.0% 21.1% MEPCTTPVRSPQSNGMAEAFVKTFKRD- 14 A6X1S5_OCHA4/107-219 96.5% 16.5% LVHSMSRRGNCHDNAVAESFFNLLK--- 15 F9VEV0_LACGL/68-184 99.1% 21.2% LLASYSKPGYPYDNAVTEVFFKYLKQR- 16 Q8E0T3_STRA5/107-222 99.1% 21.4% IMHSFSKPGYPYDNAVTEAFFKYLKHR- 17 I3U489_ENTFC/38-151 99.1% 17.4% INRSLSHKGCPFDNAVAESTYKSLKVEF 18 Q03B13_LACP3/103-218 98.2% 16.9% WQRSFSALGKPGDNAWSESFFAIMKKEL 19 P73967_SYNY3/53-168 98.2% 18.6% VKISMDGRGRCFDNIFIERLWRSLKYEL 20 Q7M7F9_WOLSU/234-344 96.5% 21.2% IQISMNGKGRSIDNIAIERFFRTLK--- 21 Q6FCT6_ACIAD/110-224 98.2% 17.9% CVQSMSRRGNCWDNAVTESFFHTLKGH- 22 Q7CM18_LEPIN/121-236 98.2% 16.9% LRRSNSRKGNCWDNAVAESFFGSLKRE- 23 Q8CLY2_LEPIN/105-221 98.2% 16.8% IRRSNSRKGNCWDNAVAESFFSYLKREI 24 Q328A8_SHIDS/106-222 98.2% 17.6% IKQSLSRRGNCWDNSPMERFFRSLKNEW 25 T904_LACLA/91-207 98.2% 16.8% AQSSMSRKGNPYDNAMMESFYKTLKREL 26 Q32H63_SHIDS/71-186 98.2% 14.4% LKTSMSRKGNCYDNAPMESFWGTLKNE- 27 Y1721_HAEIN/54-170 95.6% 18.0% IQQSMSRKGNCLYNSAMESFFGRLKTEC 28 Q8DYF6_STRA5/114-228 97.3% 16.9% IRPSMSRKGNSPDNGMMESFFGILKSE- 29 K7XY25_MYCHR/36-152 98.2% 18.5% ITQSMSRKGNCLDNSVIESFFGTLKREC 30 Q9CB06_LACLA/105-225 100.0% 11.6% IFQSMSRKGNCHDNSVMENFFGLLKQEI 31 INSK_ECOLI/117-234 99.1% 17.6% IKQSMSRKGNCLDNAVVECFFGTLKSEC 32 Q03XH7_LEUMM/40-147 94.7% 18.2% IDQ--SRKGHPYDNARIESFHSLIKREL 33 Q7DAW1_LACLA/116-233 98.2% 17.5% MTHSFSRRGYPYHNASLESWHGHLKREW 34 G2PGW7_STRVO/120-238 98.2% 17.4% ASASVGSVADSYDNAMAEALNGTFKAEL 35 TRA9_MYCTU/102-222 98.2% 17.1% IQPSVGAVGSSYDNALAETINGLYKTE- 36 Q326M8_SHIDS/37-151 98.2% 17.9% LLASTGSTGDSYDNAMAESINGLYKAE- 37 Q82T33_NITEU/30-144 98.2% 20.5% IEPSVGSRGDSYDNALAETINGLYKAE- 38 O86606_STRCO/115-235 99.1% 18.9% VTRSRGAVGTSADKAAAESLNTTMKRGT 39 Q8FSL3_COREF/34-150 100.0% 20.5% IKQSMGSIGTSADNALAESFNAALKRE- 40 I6YC39_MYCTU/135-252 99.1% 20.3% VTKSHSRPHTSNDNPLSEAQFKTLKY-- 41 Y4JA_SINFN/125-259 96.5% 10.8% MTPTRNNKGVAHENGSIESSHGHLKNAV 42 Q3XXA7_ENTFC/55-164 96.5% 12.3% FYQGTEHRTIKYLNNLIEQDHRPVKRR- 43 Q5HK26_STAEQ/66-174 94.7% 14.2% LKPDCHCT-SKYLNNLIEQDHRHIK--- 44 POL_HTL1C/1223-1331 96.5% 22.5% IRHTTHVPYNPTSSGLVERSNGILKT-- 45 POL_HTLV2/1218-1332 98.2% 17.1% IKHSTHIPYNPTSSGLVERTNGVIKNLL 46 POL_HTL32/1198-1309 97.3% 16.7% IKHSTHIPYNPTSSGLVERTNGILKT-- 47 POL_RSVSA/1336-1447 98.2% 17.5% IAHTTGIPGNSQGQAMVERANRLLKDKI 48 F9W6J4_TRYCI/667-777 98.2% 18.6% VTHLTGLPYNPQGQGIVERAHRTLKAY- 49 W5QF10_SHEEP/660-771 96.5% 16.4% IHHKTGIPYNPQGQGIVKRAHQRLKHQ- 50 POK10_HUMAN/642-756 96.5% 16.0% ISHTTGIPYNSQGQAIVERTNRTLKTQL 51 POL_MMTVC/1493-1603 96.5% 13.0% ISHVTGIPYNPQGQAIVERTHQNIKAQ- 52 POL_WDSV/1482-1596 97.3% 20.3% VAWKLHCPGHPRSSGIVERTNRTLKSKI 53 POL_XMRV6/1443-1557 98.2% 20.5% IDWKLHCAYRPQSSGQVERMNRTIKET- 54 F9W7M6_TRYCI/366-480 100.0% 21.7% INWKLHCAYRPQSSGQVERMNRTLKET- 55 P71644_MYCTU/136-254 98.2% 13.2% IAQTRSRPYQKNDQAHVESKNNHVVRKH 56 POL_HV2BE/1225-1332 93.8% 19.1% IEQSFGVPYNPQSQGVVEAMNHHLKNQI 57 YAGA_ECOLI/137-258 98.2% 25.8% IRVGHSRPYHPQTQGKLERFHRSLKAEV 58 O28959_ARCFU/127-246 95.6% 18.4% VRHVLARINHPQTNGKIERFFGLMEQKI 59 YJ41B_YEAST/620-742 99.1% 12.1% IHHILTSTQDHAANGRAERYIRTIITDA 60 E7KRB4_YEASL/2-117 95.6% 19.0% IEHQLTIPYHSYQNGAVERAHRTIEER- 61 YD11B_YEAST/660-782 99.1% 12.9% ITPCYTTTADSRAHGVAERLNRTLLDDC 62 K4CL29_SOLLC/120-235 99.1% 22.4% IRHEKTVPGTPQHNGVAERMNRTIVEK- 63 A3N0V8_ACTP2/160-284 98.2% 17.3% IEHTKTKVKHPQTNGICERFHKTILQEF 64 Q9KTS1_VIBCH/132-242 95.6% 19.8% IKFRPNKPGSPHLNGKVERSQKTDKSE- 65 INTG_SPV1C/179-314 98.2% 13.8% ILHQTTPVRSPQSNGKIERFHQNYTKLF 66 Q4JUC9_CORJK/130-281 99.1% 19.0% IRHKRTRPYRPQTNGKIERFHRTLGDGW 67 O86758_STRCO/130-269 97.3% 15.4% ISPRWTRPWRPQTNGKVERFHRTLLDEW 68 O86023_CLAMS/137-276 99.1% 16.3% ARQKFIRPHCPWQNGKVERFNRTLATEW 69 INTG_SPV1R/173-280 92.9% 14.2% TQVYFCDAGSPQQKPLIEYMNSELRHWF 70 Q4JWM1_CORJK/216-324 92.9% 18.3% CQVFFCEPHSPWQRPTNENTNGEIRRRF 71 O53337_MYCTU/180-292 95.6% 12.7% APVYFCDSRSPWQRASNENSNGLLRQYF 72 TRA8_CUPMC/175-287 94.7% 18.5% VRVYFCDPHSPWQRGTCENTNGLLRQYL 73 INSI4_ECOLI/226-337 93.8% 16.8% VKVYFCDPQSPWQRGTNENTNGLIRQYF 74 I6X5T4_MYCTU/115-244 97.3% 15.2% AKVLICRPADPEAKGLIERAHDYLERS- 75 Q5LF59_BACFN/170-296 98.2% 12.6% FQPVFCRRSDPESKGKVENVVKYVKENF 76 A0A0A1BBC9_9GAMM/130-256 99.1% 10.9% FDAQFCNPASGWEKGQIEKNVQDSRQR- 77 B7GM82_ANOFW/119-243 96.5% 11.9% FIPKVCRPYRAQTKGKVERAIQYIMDHF 78 Q9RI04_YERPE/30-157 99.1% 13.2% FLPRACRPRRARTKGKVERMVKYLKDN- 79 Q3L9G2_RHOE4/119-243 99.1% 16.7% TTLRTCLPADPESKGGSEATVRIAKAD- 80 Q7ARN5_YERPE/118-242 96.5% 12.5% FSPRLCRPFRAQTKGKVERMVQYTRN-- 81 Y3428_MYCTU/53-175 95.6% 14.8% TLVDPARARKPKDKPRVERPMTYVRDSF 82 Y4UI_SINFN/137-270 96.5% 11.6% TAVFPARPRKPRDKAKVENCVGIVERWL 83 Y4BL_SINFN/140-273 99.1% 11.1% TTILPTRSRKPRDKGRVEGAVLIVERWI 84 A4VHC8_PSEU5/128-259 99.1% 16.5% VAVVPARARKPRDKAKAEVGVQVVERW- 85 B4E7R1_BURCJ/140-272 99.1% 17.2% TAMLPARPRKPQDKAKVEVGVQIVERW- 86 O69924_STRCO/154-280 94.7% 10.5% FDIDVLAAYRPQGKGRVERQVGIVRDHV consensus/100% h............t...c.......... consensus/90% h....t..hps.tpuhhEt..t.h.t.. consensus/80% ht..hst.hps.ppuhhEph.thhcp.. consensus/70% lp.phspstps.spuhhEph.thl+pp.