Agglutinin | |
|---|---|
| SMART ACC: | SM000791 |
| Description: | Amaranthus caudatus agglutinin or amaranthin is a lectin from the ancient South American crop, amaranth grain. Although its biological function is unknown, it has a high binding specificity for the methyl-glycoside of the T-antigen, found linked to serine or threonine residues of cell surface glycoproteins (PUBMED:2271665). The protein is comprised of a homodimer, with each homodimer consisting of two beta-trefoil domains (PUBMED:9334739). |
| InterPro ACC: | IPR008998 |
| InterPro abstract: | Agglutinins are sugar-specific lectins that can agglutinate erythrocytes and other cell types. Lectins occur widely in plants, as well as some microorganisms and animal [ PUBMED:15229195 ]. Agglutinin from Amaranthus caudatus (amaranthin) is a lectin from the ancient South American crop, amaranth grain. Although its … expand |
| Family alignment: | View the Family alignment or the Alignment consensus sequence |
| There are 21 Agglutinin domains in 9 proteins in SMART's NRDB database. | |
Taxonomic distribution of proteins containing Agglutinin domains
The tree below includes only several representative species and genera. The complete taxonomic breakdown of all proteins containing Agglutinin domains can be accessed here. Click the counts or percentage values to display the corresponding proteins.
Predicted cellular role
| Cellular role: | Interaction (with the environment) |
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Relevant references for this domain
Primary literature for the Agglutinin domain is listed below. Automatically-derived, secondary literature is also available.
3D structures in PDB containing this domain
Links to other resources describing this domain
| Pfam | Agglutinin |
|---|---|
| InterPro | IPR008998 |