Bac_rhodopsin

Bac_rhodopsin

Bacteriorhodopsin-like protein
SMART ACC:SM001021
Description:The bacterial opsins are retinal-binding proteins that provide light- dependent ion transport and sensory functions to a family of halophilic bacteria (PUBMED:2468194), (PUBMED:2591367). They are integral membrane proteins believed to contain seven transmembrane (TM) domains, the last of which contains the attachment point for retinal (a conserved lysine).
InterPro ACC:IPR001425
InterPro abstract:

Bacterial rhodopsins are a family of bacterial opsins. They are retinal-binding proteins that provide light-dependent ion transport and sensory functions to a family of halophilic bacteria [ PUBMED:2468194 PUBMED:2591367 ]. They are integral … expand

GO component:membrane (GO:0016020)
Family alignment:View the Family alignment or the Alignment consensus sequence
There are 3 028 Bac_rhodopsin domains in 3 027 proteins in SMART's NRDB database.

Taxonomic distribution of proteins containing Bac_rhodopsin domains

The tree below includes only several representative species and genera. The complete taxonomic breakdown of all proteins containing Bac_rhodopsin domains can be accessed here. Click the counts or percentage values to display the corresponding proteins.

Predicted cellular role

Cellular role:Signalling

Relevant references for this domain

Primary literature for the Bac_rhodopsin domain is listed below. Automatically-derived, secondary literature is also available.

KEGG pathways involving proteins which contain this domain

This information is based on the mapping of SMART genomic protein database to KEGG orthologous groups. Percentages are related to the number of proteins containing a Bac_rhodopsin domain which could be assigned to a KEGG orthologous group, and not all proteins containing Bac_rhodopsin domains. Please note that proteins can be included in multiple pathways, ie. the numbers below will not add to 100%.

KEGG pathways

Some of these pathways are included in the interactive Pathways Explorer overview maps. Select an overview map and click the button below to highlight them in iPath.

KEGG orthologous groups

Some of these KOs are included in the interactive Pathways Explorer overview maps. Select an overview map and click the button below to highlight them in iPath.

3D structures in PDB containing this domain

Links to other resources describing this domain

InterProIPR001425
PfamBac_rhodopsin