PGA_cap

PGA_cap

Bacterial capsule synthesis protein PGA_cap
SMART ACC:SM000854
Description:This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.
InterPro ACC:IPR019079
InterPro abstract:

CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein [ PUBMED:16689787 ].

Family alignment:View the Family alignment or the Alignment consensus sequence
There are 12 422 PGA_cap domains in 12 414 proteins in SMART's NRDB database.

Taxonomic distribution of proteins containing PGA_cap domains

The tree below includes only several representative species and genera. The complete taxonomic breakdown of all proteins containing PGA_cap domains can be accessed here. Click the counts or percentage values to display the corresponding proteins.

Predicted cellular role

Cellular role:Metabolic

Relevant references for this domain

Primary literature for the PGA_cap domain is listed below. Automatically-derived, secondary literature is also available.

KEGG pathways involving proteins which contain this domain

This information is based on the mapping of SMART genomic protein database to KEGG orthologous groups. Percentages are related to the number of proteins containing a PGA_cap domain which could be assigned to a KEGG orthologous group, and not all proteins containing PGA_cap domains. Please note that proteins can be included in multiple pathways, ie. the numbers below will not add to 100%.

KEGG pathways

Some of these pathways are included in the interactive Pathways Explorer overview maps. Select an overview map and click the button below to highlight them in iPath.

KEGG orthologous groups

Some of these KOs are included in the interactive Pathways Explorer overview maps. Select an overview map and click the button below to highlight them in iPath.

3D structures in PDB containing this domain

Links to other resources describing this domain

PfamPGA_cap
InterProIPR019079