 Y1_TnpTransposase IS200 like | |
|---|---|
| SMART ACC: | SM001321 |
| Description: | Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases for IS200 from E. coli. |
| InterPro ACC: | IPR002686 |
| InterPro abstract: | Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This entry represents a domain found in transposases for IS200 from Escherichia coli [ PUBMED:10471738 ]. |
| GO process: | DNA transposition (GO:0006313) |
| GO function: | DNA binding (GO:0003677), transposase activity (GO:0004803) |
| Family alignment: | View the Family alignment or the Alignment consensus sequence |
| There are 29 657 Y1_Tnp domains in 29 651 proteins in SMART's NRDB database. | |
Taxonomic distribution of proteins containing Y1_Tnp domains
The tree below includes only several representative species and genera. The complete taxonomic breakdown of all proteins containing Y1_Tnp domains can be accessed here. Click the counts or percentage values to display the corresponding proteins.
Predicted cellular role
| Cellular role: | Transport |
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Relevant references for this domain
Primary literature for the Y1_Tnp domain is listed below. Automatically-derived, secondary literature is also available.
KEGG pathways involving proteins which contain this domain
This information is based on the mapping of SMART genomic protein database to KEGG orthologous groups. Percentages are related to the number of proteins containing a Y1_Tnp domain which could be assigned to a KEGG orthologous group, and not all proteins containing Y1_Tnp domains. Please note that proteins can be included in multiple pathways, ie. the numbers below will not add to 100%.