CBM_25

CBM_25

Carbohydrate binding domain
SMART ACC:SM001066
Description: -
InterPro ACC:IPR005085
InterPro abstract:

This entry represents which has been shown to bind starch [ PUBMED:16230347 ].

A carbohydrate-binding module (CBM) is defined as a contiguous amino acid sequence within a carbohydrate-active enzyme with a discreet fold having carbohydrate-binding activity. A few exceptions are CBMs in cellulosomal scaffolding … expand

GO function:starch binding (GO:2001070)
Family alignment:View the Family alignment or the Alignment consensus sequence
There are 1 715 CBM_25 domains in 792 proteins in SMART's NRDB database.

Taxonomic distribution of proteins containing CBM_25 domains

The tree below includes only several representative species and genera. The complete taxonomic breakdown of all proteins containing CBM_25 domains can be accessed here. Click the counts or percentage values to display the corresponding proteins.

Predicted cellular role

Cellular role:Metabolic
Binding / catalysis:Carbohydrate binding domain

KEGG pathways involving proteins which contain this domain

This information is based on the mapping of SMART genomic protein database to KEGG orthologous groups. Percentages are related to the number of proteins containing a CBM_25 domain which could be assigned to a KEGG orthologous group, and not all proteins containing CBM_25 domains. Please note that proteins can be included in multiple pathways, ie. the numbers below will not add to 100%.

KEGG pathways

Some of these pathways are included in the interactive Pathways Explorer overview maps. Select an overview map and click the button below to highlight them in iPath.

KEGG orthologous groups

Some of these KOs are included in the interactive Pathways Explorer overview maps. Select an overview map and click the button below to highlight them in iPath.

3D structures in PDB containing this domain

Links to other resources describing this domain

PfamCBM_25
InterProIPR005085