GGDEF

GGDEF

diguanylate cyclase
SMART ACC:SM000267
Description:Diguanylate cyclase, present in a variety of bacteria.
InterPro ACC:IPR000160
InterPro abstract:

The GGDEF domain, which has been named after the conserved central sequence pattern GG[DE][DE]F is widespread in prokaryotes. It is typically present in multidomain proteins containing regulatory domains of signalling pathways or protein-protein or protein-ligand interaction modules, such as the response regulatory domain, the PAS/PAC domain, the HAMP domain, the GAF domain, the FHA domain or … expand

Family alignment:View the Family alignment or the Alignment consensus sequence
There are 251 213 GGDEF domains in 250 015 proteins in SMART's NRDB database.

Taxonomic distribution of proteins containing GGDEF domains

The tree below includes only several representative species and genera. The complete taxonomic breakdown of all proteins containing GGDEF domains can be accessed here. Click the counts or percentage values to display the corresponding proteins.

Predicted cellular role

Cellular role:Signalling

Relevant references for this domain

Primary literature for the GGDEF domain is listed below. Automatically-derived, secondary literature is also available.

KEGG pathways involving proteins which contain this domain

This information is based on the mapping of SMART genomic protein database to KEGG orthologous groups. Percentages are related to the number of proteins containing a GGDEF domain which could be assigned to a KEGG orthologous group, and not all proteins containing GGDEF domains. Please note that proteins can be included in multiple pathways, ie. the numbers below will not add to 100%.

KEGG pathways

Some of these pathways are included in the interactive Pathways Explorer overview maps. Select an overview map and click the button below to highlight them in iPath.

KEGG orthologous groups

Some of these KOs are included in the interactive Pathways Explorer overview maps. Select an overview map and click the button below to highlight them in iPath.

3D structures in PDB containing this domain

Links to other resources describing this domain

InterProIPR000160