TRP_N

TRP_N

ML-like domain
SMART ACC:SM001320
Description:This domain might be involved in lipid binding. (by similarity)
InterPro ACC:IPR032800
InterPro abstract:

This domain is distantly similar to MD-2-related lipid-recognition domain ( IPR003172 ) and conserves its pattern of conserved cysteines. This suggests that this domain may be involved in lipid binding. Proteins containing this domain include flavin carrier protein 1/2 from budding yeasts [ expand

Family alignment:View the Family alignment or the Alignment consensus sequence
There are 1 869 TRP_N domains in 1 867 proteins in SMART's NRDB database.

Taxonomic distribution of proteins containing TRP_N domains

The tree below includes only several representative species and genera. The complete taxonomic breakdown of all proteins containing TRP_N domains can be accessed here. Click the counts or percentage values to display the corresponding proteins.

Relevant references for this domain

Primary literature for the TRP_N domain is listed below. Automatically-derived, secondary literature is also available.

KEGG pathways involving proteins which contain this domain

This information is based on the mapping of SMART genomic protein database to KEGG orthologous groups. Percentages are related to the number of proteins containing a TRP_N domain which could be assigned to a KEGG orthologous group, and not all proteins containing TRP_N domains. Please note that proteins can be included in multiple pathways, ie. the numbers below will not add to 100%.

KEGG pathways

Some of these pathways are included in the interactive Pathways Explorer overview maps. Select an overview map and click the button below to highlight them in iPath.

KEGG orthologous groups

Some of these KOs are included in the interactive Pathways Explorer overview maps. Select an overview map and click the button below to highlight them in iPath.

Links to other resources describing this domain

PfamTRP_N
InterProIPR032800