NC31542_1 RDEYVYKAKLAEQAERYDEMAEAMKNLVENCLDEQQPKDELSVEERNLLSVAYKNAVGAR CONSENSUS/80% R-E.VYhAKLAEQAERYEEMVEFMEKVucss.......-ELTVEERNLLSVAYKNVIGAR CONSENSUS/65% REENVYMAKLAEQAERYEEMVEFMEKVAKss-.....sEELTVEERNLLSVAYKNVIGAR CONSENSUS/50% REENVYMAKLAEQAERYEEMVEFMEKVAKTsD.....oEELTVEERNLLSVAYKNVIGAR NC31542_1 RASWRIISSVEQKELSKQ-HMQNKALAAEYRQKVEEELNKICHDILQLLTDKLIPKTS-- CONSENSUS/80% RASWRIISSIEQKE-SRG NpspVu.I+-YRsKIEsELoKICDGILpLL-s+LlPuuo CONSENSUS/65% RASWRIISSIEQKEESRG NED+VulIK-YRsKIEoELSKICDGILpLL-oHLlPSAS CONSENSUS/50% RASWRIISSIEQKEESRG NEDHVAlIKDYRuKIETELSKICDGILKLLESHLIPSAS NC31542_1 DSESKVFYYKMKGDYYRYISEFSGEE-GKKQAADQAQESYQKATETAEGHSPATHPIRLG CONSENSUS/80% suESKVFYLKMKGDYaRYLAEFKsGA.ERK-AAEsThhuYKuAQDIA.A-LssTHPIRLG CONSENSUS/65% suESKVFYLKMKGDYHRYLAEFKTGA.ERKEAAEsTLlAYKSAQDIALA-LsPTHPIRLG CONSENSUS/50% uAESKVFYLKMKGDYHRYLAEFKTGA.ERKEAAENTLVAYKSAQDIALAELPPTHPIRLG NC31542_1 LALNYS--VFFYEILNLPQQACEMAKRAFDDAITEFDNVSEDSYKDSTL-IMQLLRDNLT CONSENSUS/80% LALNaS VFYYEILNSPDRACsLAKQAFD-AIuELDoLuEESYKDSTL IMQLLRDNLT CONSENSUS/65% LALNFS VFYYEILNSPDRACsLAKQAFDEAIuELDTLGEESYKDSTL IMQLLRDNLT CONSENSUS/50% LALNFS VFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTL IMQLLRDNLT NC31542_1 LWTSDLQAD-QQQQEGG CONSENSUS/80% LWTSDhp-- st--I+E CONSENSUS/65% LWTSDhs-D uuDEI+E CONSENSUS/50% LWTSDlsDD uuDEIKE
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |