6945.ISCW003089-PA_from_382_to_519IQISTS---TSN-----GVAGEYAIFHV---RTNFY---------IKFFHYLVISKG--- CONSENSUS/80% lpl......tt......htsGpthph.l...p..h.............hhhhhhtp.... CONSENSUS/65% lplphs...ppt.....hpsGcphplpl...psshs...........shhhlsls+s... CONSENSUS/50% Lclpsc...pss.....hpsG-stplpl...psshs..........hshsYlllu+G... 6945.ISCW003089-PA_from_382_to_519-----------TVLQAG--------VQKAY------------------------------ CONSENSUS/80% ...........thl.............................................. CONSENSUS/65% ...........phlhts.......phhpht.............................. CONSENSUS/50% ...........sllhss.......pthsls.............................. 6945.ISCW003089-PA_from_382_to_519-GLLQTITSFSVPLSPE--MAP-AIKVMVYQI---------------------------- CONSENSUS/80% .....t...hph.hp.t..hhs.thhl.shhh............................ CONSENSUS/65% ....ttthshplslstp..hsP.sshlhshhlh........................... CONSENSUS/50% ....psssolslslosc..huP.ssplllahlp........................... 6945.ISCW003089-PA_from_382_to_519---------SGNGD-----------LTADAVIVPVR--GINRGN---------------- CONSENSUS/80% ............tt...........hhhs.h.h.lt.....tp................. CONSENSUS/65% ...........sssp..........hhhsshhlsVp..ts.pph................ CONSENSUS/50% ...........sssc..........lls-slplsVc..sspssh................ 6945.ISCW003089-PA_from_382_to_519-----------FYLWKNLKQDR-----SNNLIELVPTYTTE-----------------TI CONSENSUS/80% ................s.tph......Ptpphplplpst...................uh CONSENSUS/65% ...........h.hhhs.pphp.....Pupphplplpssss.................uh CONSENSUS/50% ...........lslpsssspsc.....PGsslslclpusss.................uh 6945.ISCW003089-PA_from_382_to_519AGLNGLDSDLVAV CONSENSUS/80% hslhsVDpulh.l CONSENSUS/65% lsltuVDpulhhl CONSENSUS/50% VuLsAVDculLtL
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |