CAA18093/1-173 QAASPRWEPQIAVLCEAGQIYQPQYLSEEGRWVTDLSKKTTGPTCLRDKMDLLDYCKKAY CONSENSUS/80% usst.hhpPQlAhhCGthshahs.p....G+WcsDsptppo...ClpsK.clLpYCpchY CONSENSUS/65% usst.hhpPQlAhhCGthshahs.p....G+WcsDsptppo...ClpsK.clLpYCpchY CONSENSUS/50% GsupshuEPQIAhhCG+LNhHhslps...G+W-oDPo+o+T...CLcsKp-lLcYC+csY CAA18093/1-173 PNRDITNIVESSHYQKIGGWCRQGALNAAKCKGSHRWIKPFRCL-GPFQSDALLVPEGCL CONSENSUS/80% PphpITNlhEusp.lsIpsWC+pstp...pC+tp.+.VhPa+CLsGEFhS-ALLVP-sCp CONSENSUS/65% PphpITNlhEusp.lsIpsWC+pstp...pC+tp.+.VhPa+CLsGEFhS-ALLVP-sCp CONSENSUS/50% PELQITNVVEAoQsVsIssWCRcu+p...pCKss.HhVlPFRCLsGEFVSDALLVPEsCp CAA18093/1-173 FDHIHNASRCWPFVRWNQTGAAACQER------GMQMRSFAMLLPCGISVFSGVEFVCCP CONSENSUS/80% F.H.cph-.Cpsa.+W+p.utcsCppc......uh.l+uauMLLPCGlDhFpGVEaVCCP CONSENSUS/65% F.H.cph-.Cpsa.+W+p.utcsCppc......uh.l+uauMLLPCGlDhFpGVEaVCCP CONSENSUS/50% FhHQERMDpCEsapRWHssApEACpo+......GMpL+SaGMLLPCGlDpF+GVEFVCCP
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |