SWISS|O28303|PR PPKGVLLYGP-PG-TGKTLLA-KAVANQTRA----------------------------- CONSENSUS/80% ..t.hhlhG..sG.sGKohhh.thlht.h............................... CONSENSUS/65% tsphlhlhGs.sG.sGKoslh.ptltt.ht.............................. CONSENSUS/50% sspslhlsGs.sG.oGKTTls.ptlupplspp............................ SWISS|O28303|PR ---TFIRVVGSEFVQ--------------------------------------------- CONSENSUS/80% ....hhhhsht................................................. CONSENSUS/65% ...thhhlsssth............................................... CONSENSUS/50% .ttsllhlsssshttt............................................ SWISS|O28303|PR ------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ SWISS|O28303|PR ---------------------------------------------------------KYI CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ........................................................ttts SWISS|O28303|PR GEGARLVR-EVFQLAKEKA---------------------------------------PS CONSENSUS/80% ....t..t..hhthhtt..........................................t CONSENSUS/65% htttpthp.hhhthspp..........................................p CONSENSUS/50% sssspphc.tshstucpt.........................................s SWISS|O28303|PR IIFIDE-LDAIAARRTNSDTSGDREVQRT------------------------------- CONSENSUS/80% llhhDp.htth................................................. CONSENSUS/65% llllD-.hsphhptttth.......................................... CONSENSUS/50% llllDE.ssshtcsppptthh....................................... SWISS|O28303|PR ------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ SWISS|O28303|PR ------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ SWISS|O28303|PR ------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ SWISS|O28303|PR --MMQLLAELDGFDPRGDVKVIGATNR--------------------------IDILDPA CONSENSUS/80% ....................hlhhsp.................................. CONSENSUS/65% ...............ttthtllhssp...............................htt CONSENSUS/50% .........httttppssssllssss............................thhtss SWISS|O28303|PR ILRP------GRFDRIIEV-PLPT CONSENSUS/80% .hh..........t..h.h..... CONSENSUS/65% hht........hhpphlhh.ttht CONSENSUS/50% shpt.......thcpplth.ppss
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |