Q9UKJ8/491-627 QDGIPCS----DS-AYCYQKRCNNHDQHCREIFGKD----AKSASQNCYKEINSQGNRF- CONSENSUS/80% .sG..C.....tt.thChpG.C..httQC.tlaG.t....spsu...Cap.hN.tus.h. CONSENSUS/65% psGpPC.....pt.uYCasGpC.shspQChplaG.s....upsAsptCap.hNppGspa. CONSENSUS/50% pDGpPCt....sstGYCYsGpCsshspQCpsLFGss....AcsAscsCYcplNscG-ca. Q9UKJ8/491-627 GHCGINGTT---YLK-CHIS---------------------------------------- CONSENSUS/80% G.Ctht..........Ct.p........................................ CONSENSUS/65% GpCspps...tthh..Ct.p........................................ CONSENSUS/50% GNCG+cs...spals.Cssc........................................ Q9UKJ8/491-627 ---DVFCGRVQCENVR-DIPLLQDHFTLQHTHIN----------GVTCWGIDYHLRMN-- CONSENSUS/80% ...shhCGpl.Cp..................................Ch.h....t.... CONSENSUS/65% ...DshCG+LhCptst.t........s.h.s.h.............hChuhph..s.... CONSENSUS/50% ...DlhCG+LhCpssp.phshhttphshhpssht..........thsChuhcsppspp.. Q9UKJ8/491-627 ----I----------SDIGEVKDGTVCGPGKICIH-KKCVSL CONSENSUS/80% ..................s.V.sGT.Cu.shhC.p.tpChth CONSENSUS/65% ................t.GhVpsGThCuss+lChs.tpClsh CONSENSUS/50% ...th...........D.GhVpcGTpCGsGKVChs.pcCVcs
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |