A55922/2 REAFQALEKLNNRQ----LNYVQLEIDIK--------NEIIILANT---------TNTEL CONSENSUS/80% p.tht.h.c.htth.....phhhhtl.t.........tpplhhtth.........t.tts CONSENSUS/65% cspppthtchtptcp....phllaplspp........sppllltph.........sssss CONSENSUS/50% ccs+pphsEhpcc+p...h+sllapIscs........sccIlVscsu........sssss A55922/2 KDLP-KRIP-----KDSARYHFFLYKHSH--------EGDYLESIVFIYSMPGYTCSIRE CONSENSUS/80% hpphht.hs.....tppspYshhphp...........tsthtchhhh.as.spts...cp CONSENSUS/65% asphsppLP.....tpcsRYulachpht.........puphpchhhlhWs.P-su.sl+p CONSENSUS/50% a--FscpLP.....cc-CRYAlaDhcasst.......suc+sKllFIsWu.P-sA.sl+s A55922/2 RMLYSS-CKSRLLEIVER--QLQMDVIRKIEIDNGDELT--ADFLYEEVH CONSENSUS/80% +hhaAu.ststhtp.hts...hphthphp....s.p-hp. .p.lhpcht CONSENSUS/65% KMlYAS.o+ssl+cthpG...lphplpss....shp-ls. hstltp+lt CONSENSUS/50% KMlYAS.SKcslK+plsG...lph-lQAs....-h--ls. ccslt-KLs
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |