Y1185_METJA/1-2 --MKNALINATTKKF-------EIIEKTVLPITWGLYWHNKFE---------T---WKYD CONSENSUS/80% ..tphhhlsLsptphp...hs.chhp.alGGtGhuhhhhhp.h..............thc CONSENSUS/65% hts+llclsLsstphphpthstchhctalGG+GLustllhcth.........s....phD CONSENSUS/50% asG+lL+VDLoscclch-slsc-hh+calGGRGLGs+llh-cl.........s...sclD Y1185_METJA/1-2 AYDEKNVFCFGSGVL----PVIGGHRLIFSF-RSPLWDGFYFSSMGGA-GYQFKST--GL CONSENSUS/80% PhsspN.lhhhsGshsGh..hs.us+h.hss.+SPhTshhh.up.GGhhu.th+hs..Gh CONSENSUS/65% PhuPcNhLlhssGPLoGt..hssuuRhslss.+SPLTGslspussGGthuhpL+tu..Ga CONSENSUS/50% PLuP-NhLlFusGPLoGo.ssPsuuRhsVsu.KSPLTGsls-SNuGGpFuspLKpA..Ga Y1185_METJA/1-2 NNVAIIGRCEN---PSILVIENDGQL------RIDFIEVKEEL------KT--------V CONSENSUS/80% DtlllpGtupp...Pshlhlpp.s........thphhsutplW....G.hs........s CONSENSUS/65% DulllcG+ucc...PVhlhlps.s........plclt-ApcLW....G.hs........s CONSENSUS/50% DulllcG+u-c...PVYLhIcc.u........cVElcDAscLW....G.cs........s Y1185_METJA/1-2 YEVSKYILE-LYK----DKNLRSVVVGEAAKR-TNMGGL-FSQTVRNGKFVEGSEDWAAR CONSENSUS/80% hts.p.l.p...t......phthhsIG.AGEphshhusl.htp.....tp.sG......R CONSENSUS/65% hpstchlpc.ths......csplhsIGPAGEphlhhAsl.hss.....tRsuG......R CONSENSUS/50% hEssctLpc.phu......csulAsIGPAGENhVpaAuI.hs-t....cRuAG......R Y1185_METJA/1-2 GGGGSVLYRAHNIMGIVFF----GD- CONSENSUS/80% sGhGAVh.GuKplKAlsl.....upt CONSENSUS/65% uGhGAVM.GuKpLKAlsVc....Gsp CONSENSUS/50% GGlGAVM.GSK+LKAIVV+....Gs+
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |